RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 H3BNC9 293 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 M0R082 166 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 GUCA1CO95843 209 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 IFITM2Q01629 132 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CREMQ03060 361 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 MTAPQ13126 283 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CAMK2GQ13555 558 aaPredicted RBP21.75■■□□□ 1.07
SHANK2-220ENST00000608988 VEZF1Q14119 521 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CLPPQ16740 277 aaPredicted RBP21.75■■□□□ 1.07
SHANK2-220ENST00000608988 DUOXA1Q1HG43 343 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 PAF1Q8N7H5 531 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 KLHDC9Q8NEP7 349 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CRELD1Q96HD1 420 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 SPATA17Q96L03 361 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 ACPTQ9BZG2 426 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CIPCQ9C0C6 399 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 BPIFA1Q9NP55 256 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 THUMPD1Q9NXG2 353 aaKnown RBP21.75■■□□□ 1.07
SHANK2-220ENST00000608988 TMEM98Q9Y2Y6 226 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 PCDHGA3Q9Y5H0 932 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 MICAL3Q7RTP6 2002 aa21.75■■□□□ 1.07
SHANK2-220ENST00000608988 CDK1P06493 297 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 GPX2P18283 190 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 GADD45AP24522 165 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 PTX3P26022 381 aaPredicted RBP21.74■■□□□ 1.07
SHANK2-220ENST00000608988 GRK4P32298 578 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 TAF10Q12962 218 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 BOP1Q14137 746 aaKnown RBP21.74■■□□□ 1.07
SHANK2-220ENST00000608988 FAM171A1Q5VUB5 890 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 PARP16Q8N5Y8 322 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 DNASE1L2Q92874 299 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 ERLEC1Q96DZ1 483 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 RHNO1Q9BSD3 238 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 CCDC32Q9BV29 185 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 CDADC1Q9BWV3 514 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 C6orf62Q9GZU0 229 aaPredicted RBP21.74■■□□□ 1.07
SHANK2-220ENST00000608988 SNX6Q9UNH7 406 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 RBMX2Q9Y388 322 aaKnown RBP21.74■■□□□ 1.07
SHANK2-220ENST00000608988 PCDHGA6Q9Y5G7 932 aa21.74■■□□□ 1.07
SHANK2-220ENST00000608988 PSMD11O00231 422 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 PLK4O00444 970 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 STK16O75716 305 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 ZDHHC11BP0C7U3 371 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CTPS1P17812 591 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CD52P31358 61 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 GGT2P36268 569 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 SLC11A2P49281 568 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 EIF4HQ15056 248 aaKnown RBP21.73■■□□□ 1.07
SHANK2-220ENST00000608988 SGO1Q5FBB7 561 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 DESI1Q6ICB0 168 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 NCEH1Q6PIU2 408 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CHST9Q7L1S5 443 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 METTL4Q8N3J2 472 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 DNAJC22Q8N4W6 341 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 ZBTB2Q8N680 514 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 MAGEB10Q96LZ2 347 aaPredicted RBP21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CLSTN3Q9BQT9 956 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 NEK6Q9HC98 313 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 KLHL42Q9P2K6 505 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 AASSQ9UDR5 926 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 PCDHGC4Q9Y5F7 938 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 KLK4Q9Y5K2 254 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CENPBD1B2RD01 187 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 PGLSO95336 258 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 KRT8P05787 483 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CBSLP0DN79 551 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CBSP35520 551 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 HMGCLP35914 325 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 LIMK1P53667 647 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 VLDLRP98155 873 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 AGAP6Q5VW22 663 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 ZCCHC8Q6NZY4 707 aaKnown RBP21.73■■□□□ 1.07
SHANK2-220ENST00000608988 NEK5Q6P3R8 708 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 ZSWIM9Q86XI8 627 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CFAP52Q8N1V2 620 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CLHC1Q8NHS4 586 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 C9orf43Q8TAL5 461 aaPredicted RBP21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CHTF18Q8WVB6 975 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 HSH2DQ96JZ2 352 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 COL21A1Q96P44 957 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 AGAP4Q96P64 663 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 RASSF1Q9NS23 344 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 DLGAP4Q9Y2H0 992 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 GRIP1Q9Y3R0 1128 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 PCDHGB3Q9Y5G1 929 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 ACTL7AQ9Y615 435 aa21.73■■□□□ 1.07
SHANK2-220ENST00000608988 ZFP37Q9Y6Q3 630 aaPredicted RBP21.73■■□□□ 1.07
SHANK2-220ENST00000608988 CLCA1A8K7I4 914 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 hCG_2039718K7EN88 272 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 DSCR3O14972 297 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 SYN3O14994 580 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 KCNK5O95279 499 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 RHOCP08134 193 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 CDKN2CP42773 168 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 KIR3DL1P43629 444 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 SEPHS1P49903 392 aa21.72■■□□□ 1.07
SHANK2-220ENST00000608988 SRSF11Q05519 484 aaKnown RBP21.72■■□□□ 1.07
SHANK2-220ENST00000608988 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.72■■□□□ 1.07
SHANK2-220ENST00000608988 GDF6Q6KF10 455 aaPredicted RBP21.72■■□□□ 1.07
SHANK2-220ENST00000608988 ZNF544Q6NX49 715 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms