RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PIK3R1P27986 724 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 EPHA3P29320 983 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 ARL1P40616 181 aaPredicted RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 MAPK9P45984 424 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 PIK3CGP48736 1102 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 CSNK1EP49674 416 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 LRP8Q14114 963 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 PTK2BQ14289 1009 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 SYTL1Q8IYJ3 562 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 EFCAB3Q8N7B9 438 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 DTWD2Q8NBA8 298 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 OR56A3Q8NH54 315 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 DNASE2BQ8WZ79 361 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 FERD3LQ96RJ6 166 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 KLHL4Q9C0H6 718 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 VCX3BQ9H321 246 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 SLC32A1Q9H598 525 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 XKR8Q9H6D3 395 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 GIMAP2Q9UG22 337 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 ANGPTL3Q9Y5C1 460 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 H3BNX3 289 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 SDHDO14521 159 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 TNFP01375 233 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 THRAP10827 490 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 CD1EP15812 388 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 YBX1P67809 324 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 TSTA3Q13630 321 aaPredicted RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 SFT2D3Q587I9 215 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 SCIMPQ6UWF3 145 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 ACAD11Q709F0 780 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 THOC6Q86W42 341 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 GPBAR1Q8TDU6 330 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 C3orf30Q96M34 536 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 HBEGFQ99075 208 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 TRIT1Q9H3H1 467 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 DNAJC11Q9NVH1 559 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 ZNF624Q9P2J8 865 aaPredicted RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 APOBEC3BQ9UH17 382 aaKnown RBP16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 RNF11Q9Y3C5 154 aa16.79■□□□□ 0.28
PPFIA3-207ENST00000602716 E7ENX8 843 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 E7EQ34 232 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 TLR4O00206 839 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 CASQ2O14958 399 aaPredicted RBP16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 SLC22A2O15244 555 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 KCNJ13O60928 360 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 MTHFD1P11586 935 aaKnown RBP16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 EPB42P16452 691 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 JUNDP17535 347 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 NXPH1P58417 271 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 TAP2Q03519 686 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 LSM12Q3MHD2 195 aaKnown RBP16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 LPCAT4Q643R3 524 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 CPSF7Q8N684 471 aaKnown RBP16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 TWIST2Q8WVJ9 160 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 CCDC28BQ9BUN5 200 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 ZNF385DQ9H6B1 395 aa16.78■□□□□ 0.28
PPFIA3-207ENST00000602716 FFAR3O14843 346 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 PIP5K1BO14986 540 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 GPR42O15529 346 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 HRO43593 1189 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 CAPN1P07384 714 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 CD22P20273 847 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 PEX2P28328 305 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 PNLIPRP1P54315 467 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 ILF3Q12906 894 aaKnown RBP eCLIP16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 PRRT3Q5FWE3 981 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 PMS2CLQ68D20 193 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 LPCAT2Q7L5N7 544 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 LINC01555Q8NAE3 123 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 HIPK4Q8NE63 616 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 ATP6V1E2Q96A05 226 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 RAD51AP1Q96B01 352 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 FAM192AQ9GZU8 254 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 TMEM74BQ9NUR3 256 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 TAAR2Q9P1P5 351 aa16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 PRPF19Q9UMS4 504 aaKnown RBP16.77■□□□□ 0.28
PPFIA3-207ENST00000602716 ATP6AP2A0A1C7CYW4 349 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 ATP6AP2O75787 350 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 OTCP00480 354 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 ZCCHC18P0CG32 403 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 ERGP11308 486 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 PSMB5P28074 263 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 DHPSP49366 369 aaPredicted RBP16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 LRRC36Q1X8D7 754 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 TMEM198Q66K66 360 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 ABRAXAS1Q6UWZ7 409 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 SNX32Q86XE0 403 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 KLHDC8AQ8IYD2 350 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 TBC1D21Q8IYX1 336 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 CLYBLQ8N0X4 340 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 GAB3Q8WWW8 586 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 ATL1Q8WXF7 558 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 CAMK1GQ96NX5 476 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 VTI1BQ9UEU0 232 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 PCOLCE2Q9UKZ9 415 aa16.77■□□□□ 0.27
PPFIA3-207ENST00000602716 BCAT2O15382 392 aaPredicted RBP16.76■□□□□ 0.27
PPFIA3-207ENST00000602716 PEX1O43933 1283 aa16.76■□□□□ 0.27
PPFIA3-207ENST00000602716 SNUPNO95149 360 aaKnown RBP16.76■□□□□ 0.27
PPFIA3-207ENST00000602716 FGF4P08620 206 aa16.76■□□□□ 0.27
PPFIA3-207ENST00000602716 PIM1P11309 404 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms