RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 RBMS1P29558 406 aaKnown RBP18.61■□□□□ 0.57
UPF1-209ENST00000600310 GGT5P36269 586 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 GRIA3P42263 894 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 MAPK10P53779 464 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 YBX1P67809 324 aaKnown RBP18.61■□□□□ 0.57
UPF1-209ENST00000600310 ACY1Q03154 408 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 ZNF844Q08AG5 666 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 KCNAB1Q14722 419 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 PTCHD3Q3KNS1 767 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 THEMIS2Q5TEJ8 643 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 FIGLAQ6QHK4 219 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 LCTLQ6UWM7 567 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 KLHDC8AQ8IYD2 350 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 ALKBH8Q96BT7 664 aaKnown RBP18.61■□□□□ 0.57
UPF1-209ENST00000600310 PYCR2Q96C36 320 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 TAAR9Q96RI9 348 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 HAUS8Q9BT25 410 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 FAM60AQ9NP50 221 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 MRPS30Q9NP92 439 aaKnown RBP18.61■□□□□ 0.57
UPF1-209ENST00000600310 ABCF3Q9NUQ8 709 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 CD274Q9NZQ7 290 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 PTBP2Q9UKA9 531 aaKnown RBP18.61■□□□□ 0.57
UPF1-209ENST00000600310 KLHL20Q9Y2M5 609 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 PCDHGA3Q9Y5H0 932 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 CHD8Q9HCK8 2581 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 SPEGQ15772 3267 aa18.61■□□□□ 0.57
UPF1-209ENST00000600310 CDRT15L2A8MXV6 281 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 FOXO6A8MYZ6 492 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 SUPT3HB4E1H0 165 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 UBXN8O00124 270 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 TAPBPO15533 448 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 BRINP1O60477 761 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 SUPT3HO75486 399 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 S100BP04271 92 aaPredicted RBP18.6■□□□□ 0.57
UPF1-209ENST00000600310 EBLN1P0CF75 366 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 NPPBP16860 134 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 RAB15P59190 212 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 FOXM1Q08050 763 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 IL11RAQ14626 422 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 KIF26BQ2KJY2 2108 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 C18orf21Q32NC0 220 aaPredicted RBP18.6■□□□□ 0.57
UPF1-209ENST00000600310 FCRL6Q6DN72 434 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 CYB5D1Q6P9G0 228 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 CDHR3Q6ZTQ4 885 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 USP7Q93009 1102 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 EXT2Q93063 718 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 OR4K3Q96R72 315 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 OR6C1Q96RD1 312 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 DDA1Q9BW61 102 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 SLC6A20Q9NP91 592 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 ASCL3Q9NQ33 180 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 FGF21Q9NSA1 209 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 WWOXQ9NZC7 414 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 ANKMY1Q9P2S6 941 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 PCDHGA7Q9Y5G6 932 aa18.6■□□□□ 0.57
UPF1-209ENST00000600310 IGKV1-8A0A0C4DH67 115 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 OR2A25A4D2G3 310 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 MAP2K7O14733 419 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 POLR1CO15160 346 aaPredicted RBP18.59■□□□□ 0.57
UPF1-209ENST00000600310 NVLO15381 856 aaKnown RBP18.59■□□□□ 0.57
UPF1-209ENST00000600310 KLK8O60259 260 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 IPO13O94829 963 aaKnown RBP18.59■□□□□ 0.57
UPF1-209ENST00000600310 GSTA1P08263 222 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 SLC6A12P48065 614 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 GABRA4P48169 554 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 TUBB3Q13509 450 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 TMEM164Q5U3C3 297 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 ZNF425Q6IV72 752 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 THOC6Q86W42 341 aaKnown RBP18.59■□□□□ 0.57
UPF1-209ENST00000600310 BPHLQ86WA6 291 aaPredicted RBP18.59■□□□□ 0.57
UPF1-209ENST00000600310 DNAJC22Q8N4W6 341 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 SCYL1Q96KG9 808 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 ZIM3Q96PE6 472 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 MRPL57Q9BQC6 102 aaKnown RBP18.59■□□□□ 0.57
UPF1-209ENST00000600310 PLCD4Q9BRC7 762 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 TMEM79Q9BSE2 394 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 DPH7Q9BTV6 452 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 CNOT10Q9H9A5 744 aaKnown RBP18.59■□□□□ 0.57
UPF1-209ENST00000600310 APMAPQ9HDC9 416 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 XPR1Q9UBH6 696 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 DKK4Q9UBT3 224 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 DCDC2Q9UHG0 476 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 SLC22A14Q9Y267 594 aa18.59■□□□□ 0.57
UPF1-209ENST00000600310 MAP1BP46821 2468 aaKnown RBP18.58■□□□□ 0.57
UPF1-209ENST00000600310 C9orf172C9J069 976 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 FGF5P12034 268 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 HRH2P25021 359 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 ERVPABLB-1P60509 514 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 SLC18A2Q05940 514 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 CYP4F3Q08477 520 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 GPR19Q15760 415 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 ST3GAL2Q16842 350 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 KRT71Q3SY84 523 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 DCAF12Q5T6F0 453 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 LRIG3Q6UXM1 1119 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 CEACAM20Q6UY09 585 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 CROCCP2Q86T23 111 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 TRABD2AQ86V40 505 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 C17orf64Q86WR6 236 aa18.58■□□□□ 0.56
UPF1-209ENST00000600310 TMEM151AQ8N4L1 468 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms