RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 FERD3LQ96RJ6 166 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 CPNE1Q99829 537 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 FAM167BQ9BTA0 163 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 CAPS2Q9BXY5 557 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 ZCCHC2Q9C0B9 1178 aaKnown RBP13.23□□□□□ -0.29
IRF3-225ENST00000600022 ACTR5Q9H9F9 607 aaPredicted RBP13.23□□□□□ -0.29
IRF3-225ENST00000600022 ZBTB20Q9HC78 741 aaPredicted RBP13.23□□□□□ -0.29
IRF3-225ENST00000600022 FAM60AQ9NP50 221 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 SLAMF7Q9NQ25 335 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 ASF1BQ9NVP2 202 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 ERRFI1Q9UJM3 462 aaPredicted RBP13.23□□□□□ -0.29
IRF3-225ENST00000600022 ACSL5Q9ULC5 683 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 ZNF451Q9Y4E5 1061 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 DOPEY1Q5JWR5 2465 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 CSMD1Q96PZ7 3565 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 GSAPA4D1B5 854 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 C2orf81A6NN90 581 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 ZNF749O43361 778 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 KLF7O75840 302 aaPredicted RBP13.22□□□□□ -0.29
IRF3-225ENST00000600022 SLC35G4P0C7Q5 338 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 CBSLP0DN79 551 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 GCAP28676 217 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 SPRP35270 261 aaPredicted RBP13.22□□□□□ -0.29
IRF3-225ENST00000600022 CBSP35520 551 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 GP5P40197 560 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 NR6A1Q15406 480 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 ZNF658BQ4V348 819 aaPredicted RBP13.22□□□□□ -0.29
IRF3-225ENST00000600022 BCL7AQ4VC05 210 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 GRTP1Q5TC63 336 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 ZDHHC20Q5W0Z9 365 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 ZNF385CQ66K41 422 aaPredicted RBP13.22□□□□□ -0.29
IRF3-225ENST00000600022 CES3Q6UWW8 571 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 CDHR3Q6ZTQ4 885 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 TRIM73Q86UV7 250 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 TRABD2AQ86V40 505 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 OTUD6BQ8N6M0 293 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 OR8K5Q8NH50 307 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 STYXQ8WUJ0 223 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 ZFPM2Q8WW38 1151 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 LCN9Q8WX39 176 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 INPP5DQ92835 1189 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 DNAJC1Q96KC8 554 aaKnown RBP13.22□□□□□ -0.29
IRF3-225ENST00000600022 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 SPRTNQ9H040 489 aaPredicted RBP13.22□□□□□ -0.29
IRF3-225ENST00000600022 IQCGQ9H095 443 aaKnown RBP13.22□□□□□ -0.29
IRF3-225ENST00000600022 SRMSQ9H3Y6 488 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 SMYD2Q9NRG4 433 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 LATS2Q9NRM7 1088 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 C1GALT1Q9NS00 363 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 SLC2A6Q9UGQ3 507 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 PIKFYVEQ9Y2I7 2098 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 CCDC88CQ9P219 2028 aa13.22□□□□□ -0.29
IRF3-225ENST00000600022 CCDC78A2IDD5 438 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 WIPF3A6NGB9 483 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 AGAP14A8MT82 685 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 CNOT3O75175 753 aaKnown RBP13.21□□□□□ -0.29
IRF3-225ENST00000600022 CBX6O95503 412 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 TPBGLP0DKB5 382 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 ERVK-10P10266 1014 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 OTX2P32243 289 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 HADHAP40939 763 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 GYS2P54840 703 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 PRAMEP78395 509 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 KRT33BQ14525 404 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 NCF4Q15080 339 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 ZIC1Q15915 447 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 C1orf189Q5VU69 101 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 ADGRF3Q8IZF5 1079 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 CLDN19Q8N6F1 224 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 ACVR1CQ8NER5 493 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 OR52E1Q8NGJ3 308 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 LINC00615Q96LM1 132 aaPredicted RBP13.21□□□□□ -0.29
IRF3-225ENST00000600022 SMAD5Q99717 465 aaKnown RBP13.21□□□□□ -0.29
IRF3-225ENST00000600022 OR52A5Q9H2C5 316 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 SSU72Q9NP77 194 aaKnown RBP13.21□□□□□ -0.29
IRF3-225ENST00000600022 INTS9Q9NV88 658 aaKnown RBP13.21□□□□□ -0.29
IRF3-225ENST00000600022 NLE1Q9NVX2 485 aaPredicted RBP13.21□□□□□ -0.29
IRF3-225ENST00000600022 PSD3Q9NYI0 1048 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 GPR83Q9NYM4 423 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 NTNG1Q9Y2I2 539 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 COLEC10Q9Y6Z7 277 aa13.21□□□□□ -0.29
IRF3-225ENST00000600022 CXorf49A8MYA2 514 aaPredicted RBP13.2□□□□□ -0.3
IRF3-225ENST00000600022 TRIM49D1C9J1S8 452 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 H3BMH7 237 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 H7C0S8 307 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 PFDN6O15212 129 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 DPM1O60762 260 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 VAPBO95292 243 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 CYP2A7P20853 494 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 MDH1P40925 334 aaKnown RBP13.2□□□□□ -0.3
IRF3-225ENST00000600022 CSE1LP55060 971 aaKnown RBP13.2□□□□□ -0.3
IRF3-225ENST00000600022 GNGT1P63211 74 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 PRKAA1Q13131 559 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 SLC9A5Q14940 896 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 DEFB110Q30KQ9 67 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
IRF3-225ENST00000600022 MLIPQ5VWP3 458 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms