RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 HADHBP55084 474 aaKnown RBP19.96■□□□□ 0.79
UPF1-207ENST00000599848 TSC22D1Q15714 1073 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 ULK3Q6PHR2 472 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 B3GNT6Q6ZMB0 384 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 TMEM110Q86TL2 294 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 TMCO6Q96DC7 493 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 FKBP14Q9NWM8 211 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 HRASLS2Q9NWW9 162 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 FETUBQ9UGM5 382 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 RPL36Q9Y3U8 105 aaKnown RBP19.96■□□□□ 0.79
UPF1-207ENST00000599848 MAP2P11137 1827 aaKnown RBP19.96■□□□□ 0.79
UPF1-207ENST00000599848 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.96■□□□□ 0.79
UPF1-207ENST00000599848 PSIP1O75475 530 aaKnown RBP19.96■□□□□ 0.79
UPF1-207ENST00000599848 METTL18O95568 372 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 CD47Q08722 323 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 ATP1A4Q13733 1029 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 CHRNA6Q15825 494 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 FRG2Q64ET8 278 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 ZNF550Q7Z398 422 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 PLCZ1Q86YW0 608 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 NXPE2Q96DL1 559 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 FRG2BQ96QU4 278 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 ZNF222Q9UK12 451 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 HCN4Q9Y3Q4 1203 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 PPLO60437 1756 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 PCDHGA12O60330 932 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 EDF1O60869 148 aaKnown RBP19.96■□□□□ 0.79
UPF1-207ENST00000599848 LCA5LO95447 670 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 SEPHS1P49903 392 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 ECM1Q16610 540 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 GFOD2Q3B7J2 385 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 GXYLT1Q4G148 440 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 PHOSPHO2Q8TCD6 241 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 EBPLQ9BY08 206 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 PRTFDC1Q9NRG1 225 aa19.96■□□□□ 0.79
UPF1-207ENST00000599848 DRD1P21728 446 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 CDH12P55289 794 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ERVK-8P63133 956 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 RING1Q06587 406 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 FUT2Q10981 343 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 IL17AQ16552 155 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 HFE2Q6ZVN8 426 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ALDH16A1Q8IZ83 802 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 C4orf32Q8N8J7 132 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 PROKR2Q8NFJ6 384 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 KAT2AQ92830 837 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 BMFQ96LC9 184 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 NMBRP28336 390 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 DMWDQ09019 674 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 IL18R1Q13478 541 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ELAVL3Q14576 367 aaKnown RBP19.95■□□□□ 0.78
UPF1-207ENST00000599848 SLC39A5Q6ZMH5 540 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 CDH24Q86UP0 819 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 SDR16C5Q8N3Y7 309 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 SNRNP27Q8WVK2 155 aaKnown RBP19.95■□□□□ 0.78
UPF1-207ENST00000599848 TNFRSF25Q93038 417 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 MFSD3Q96ES6 412 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 MPP4Q96JB8 637 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 KCND1Q9NSA2 647 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 POU2F3Q9UKI9 436 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 DAPL1A0PJW8 107 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 UBAP2Q5T6F2 1119 aaKnown RBP19.95■□□□□ 0.78
UPF1-207ENST00000599848 ZNF676Q8N7Q3 588 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 GSTCDQ8NEC7 633 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ALG2Q9H553 416 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 TMEM248Q9NWD8 314 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 PGLSO95336 258 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 IRF2P14316 349 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ECHS1P30084 290 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ACY1Q03154 408 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 RGS21Q2M5E4 152 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ADGRD1Q6QNK2 874 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 FCGR1BQ92637 280 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 CDKN2AIPNLQ96HQ2 116 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 EGFL7Q9UHF1 273 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 UTS2RQ9UKP6 389 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ZFR2Q9UPR6 939 aaKnown RBP19.95■□□□□ 0.78
UPF1-207ENST00000599848 HOXB9P17482 250 aaPredicted RBP19.95■□□□□ 0.78
UPF1-207ENST00000599848 ARSFP54793 590 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 SCARB2Q14108 478 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 CDCA2Q69YH5 1023 aaPredicted RBP19.95■□□□□ 0.78
UPF1-207ENST00000599848 ASB18Q6ZVZ8 466 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 UFD1Q92890 307 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 CLPTM1LQ96KA5 538 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 PLCL2Q9UPR0 1127 aa19.95■□□□□ 0.78
UPF1-207ENST00000599848 ZNF670-ZNF695F2Z2N8 137 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 LILRB3O75022 631 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 BANF1O75531 89 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 LINGO3P0C6S8 592 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 C5AR1P21730 350 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 RABIFP47224 123 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 ALG10Q5BKT4 473 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 KIAA0895LQ68EN5 471 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 OR10H4Q8NGA5 316 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 METTL21EPA6NDL7 271 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 FTCDNL1E5RQL4 147 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 EPOP01588 193 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 RPL5P46777 297 aaKnown RBP19.94■□□□□ 0.78
UPF1-207ENST00000599848 GTF2IRD2BQ6EKJ0 949 aa19.94■□□□□ 0.78
UPF1-207ENST00000599848 FAM131AQ6UXB0 335 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms