RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ENGP17813 658 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 PEBP1P30086 187 aaKnown RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 HMOX2P30519 316 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 PCDH1Q08174 1060 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 TCF15Q12870 199 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 PLA2G2CQ5R387 149 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 FAM219BQ5XKK7 198 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 TCEAL6Q6IPX3 200 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 EFL1Q7Z2Z2 1120 aaKnown RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 MAVSQ7Z434 540 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 ADGRF3Q8IZF5 1079 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 L3MBTL4Q8NA19 623 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 OR2I1PQ8NGU4 316 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 METTL6Q8TCB7 284 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 TWIST2Q8WVJ9 160 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 C10orf82Q8WW14 230 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 TCEAL3Q969E4 200 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.15□□□□□ -0.14
VRK3-212ENST00000596814 TIMM22Q9Y584 194 aa14.15□□□□□ -0.14
VRK3-212ENST00000596814 VPS13AQ96RL7 3174 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 LILRA5A6NI73 299 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 BTN3A3O00478 584 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 ZNF195O14628 629 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 HGSO14964 777 aaPredicted RBP14.14□□□□□ -0.15
VRK3-212ENST00000596814 PPM1DO15297 605 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 PRICKLE3O43900 615 aaPredicted RBP14.14□□□□□ -0.15
VRK3-212ENST00000596814 PRAMEF4O60810 478 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 CCNDBP1O95273 360 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 RETP07949 1114 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 SERPINB3P29508 390 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 ATXN3P54252 364 aaPredicted RBP14.14□□□□□ -0.15
VRK3-212ENST00000596814 TBCCQ15814 346 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 PRAMEF9Q5VWM5 478 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 LIPJQ5W064 366 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 ICE2Q659A1 982 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 ZCCHC8Q6NZY4 707 aaKnown RBP14.14□□□□□ -0.15
VRK3-212ENST00000596814 SLCO4C1Q6ZQN7 724 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 SLC35F3Q8IY50 421 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 CHCHD4Q8N4Q1 142 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 OR4C6Q8NH72 309 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 OR10G6Q8NH81 332 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 SLC22A18Q96BI1 424 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 SLC38A3Q99624 504 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 TBC1D10AQ9BXI6 508 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 TMEM120AQ9BXJ8 343 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 SLC29A3Q9BZD2 475 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 NUF2Q9BZD4 464 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 EHD1Q9H4M9 534 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 KCNK13Q9HB14 408 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 SPHK1Q9NYA1 384 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 KCNK4Q9NYG8 393 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 DNAJC15Q9Y5T4 150 aa14.14□□□□□ -0.15
VRK3-212ENST00000596814 ARID1BQ8NFD5 2236 aaPredicted RBP14.14□□□□□ -0.15
VRK3-212ENST00000596814 GOLGA4Q13439 2230 aaKnown RBP14.13□□□□□ -0.15
VRK3-212ENST00000596814 KCNE1BA0A087WTH5 132 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 PIPSLA2A3N6 862 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 OR6C74A6NCV1 312 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 TRPC5OSA6NMA1 111 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 ISM1B1AKI9 464 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 WFS1O76024 890 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 JUNP05412 331 aaKnown RBP14.13□□□□□ -0.15
VRK3-212ENST00000596814 CDH1P12830 882 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 JUPP14923 745 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 HNF4AP41235 474 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 CASP2P42575 452 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 ARFIP2P53365 341 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 BTKQ06187 659 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 DOC2AQ14183 400 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 KIR2DS3Q14952 304 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 CPSF6Q16630 551 aaKnown RBP eCLIP14.13□□□□□ -0.15
VRK3-212ENST00000596814 UGT3A2Q3SY77 523 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 TCHHL1Q5QJ38 904 aaPredicted RBP14.13□□□□□ -0.15
VRK3-212ENST00000596814 CATSPEREQ5SY80 951 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 ATG9BQ674R7 924 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 GRHL2Q6ISB3 625 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 NXPE4Q6UWF7 544 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 OOSP2Q86WS3 158 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 MINDY1Q8N5J2 469 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 OR2A1Q8NGT9 310 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 WDR34Q96EX3 536 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 PTCD3Q96EY7 689 aaKnown RBP14.13□□□□□ -0.15
VRK3-212ENST00000596814 TWSG1Q9GZX9 223 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 LAMA1P25391 3075 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 GPR179Q6PRD1 2367 aa14.13□□□□□ -0.15
VRK3-212ENST00000596814 SNRNP200O75643 2136 aaKnown RBP14.13□□□□□ -0.15
VRK3-212ENST00000596814 GSAPA4D1B5 854 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 RHPN2P1A8MT19 583 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 FFAR3O14843 346 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 GPR42O15529 346 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 RRP9O43818 475 aaKnown RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 PCDHGA12O60330 932 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 DIAPH2O60879 1101 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 C1GALT1C1LP0DN25 315 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 POLR2CP19387 275 aaPredicted RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 CD22P20273 847 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 VARSP26640 1264 aaKnown RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 ABATP80404 500 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 PRDX1Q06830 199 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms