RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PRDX1Q06830 199 aaKnown RBP20.23■□□□□ 0.83
PNKP-209ENST00000596726 NAA25Q14CX7 972 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 SYTL1Q8IYJ3 562 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 MNS1Q8NEH6 495 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 KIF18AQ8NI77 898 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 MCOLN3Q8TDD5 553 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 CCDC138Q96M89 665 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 DPH2Q9BQC3 489 aaPredicted RBP20.23■□□□□ 0.83
PNKP-209ENST00000596726 DPH7Q9BTV6 452 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 SLC7A5P2Q9GIP4 190 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 LRRC4CQ9HCJ2 640 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 CCDC88CQ9P219 2028 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 STOX2Q9P2F5 926 aaPredicted RBP20.23■□□□□ 0.83
PNKP-209ENST00000596726 ANKMY1Q9P2S6 941 aa20.23■□□□□ 0.83
PNKP-209ENST00000596726 FARSAQ9Y285 508 aaKnown RBP20.23■□□□□ 0.83
PNKP-209ENST00000596726 IGKV1-8A0A0C4DH67 115 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 PRKAR1AP10644 381 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 PTPN4P29074 926 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 TAS2R39P59534 338 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 PHKG1Q16816 387 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 ICE2Q659A1 982 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 RNF44Q7L0R7 432 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 CCDC25Q86WR0 208 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 ZNF655Q8N720 491 aaPredicted RBP20.22■□□□□ 0.83
PNKP-209ENST00000596726 CDKL2Q92772 493 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 VPS39Q96JC1 886 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 PLCD4Q9BRC7 762 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 ACTL8Q9H568 366 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 MRPS30Q9NP92 439 aaKnown RBP20.22■□□□□ 0.83
PNKP-209ENST00000596726 TAC3Q9UHF0 121 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 DMGDHQ9UI17 866 aaKnown RBP20.22■□□□□ 0.83
PNKP-209ENST00000596726 SRPK3Q9UPE1 567 aa20.22■□□□□ 0.83
PNKP-209ENST00000596726 CTAGE15A4D2H0 777 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 NRP2O60462 931 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 SRPX2O60687 465 aaPredicted RBP20.21■□□□□ 0.83
PNKP-209ENST00000596726 FURINP09958 794 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 CTAGE8P0CG41 777 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 ZNF37AP17032 561 aaPredicted RBP20.21■□□□□ 0.83
PNKP-209ENST00000596726 RPS15P62841 145 aaKnown RBP20.21■□□□□ 0.83
PNKP-209ENST00000596726 PTCHD3Q3KNS1 767 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 TCTE1Q5JU00 501 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 ATP1A1-AS1Q5TC04 95 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 ZNF425Q6IV72 752 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 C16orf46Q6P387 395 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 FBXO42Q6P3S6 717 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 BORAQ6PGQ7 559 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 FAM198BQ6UWH4 519 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 CTAGE6Q86UF2 777 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 CTAGE4Q8IX94 777 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 EXD3Q8N9H8 876 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 PROKR1Q8TCW9 393 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 GBP5Q96PP8 586 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 CPNE1Q99829 537 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 SELENOSQ9BQE4 189 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 NLNQ9BYT8 704 aa20.21■□□□□ 0.83
PNKP-209ENST00000596726 CCNDBP1O95273 360 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 WISP3O95389 354 aaPredicted RBP20.2■□□□□ 0.82
PNKP-209ENST00000596726 AGXTP21549 392 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 SAT1P21673 171 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 RPS18P62269 152 aaKnown RBP20.2■□□□□ 0.82
PNKP-209ENST00000596726 ABATP80404 500 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 TSTA3Q13630 321 aaPredicted RBP20.2■□□□□ 0.82
PNKP-209ENST00000596726 LY6DQ14210 128 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 ERV3-1Q14264 604 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 GLE1Q53GS7 698 aaKnown RBP20.2■□□□□ 0.82
PNKP-209ENST00000596726 MBOAT1Q6ZNC8 495 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 PAQR7Q86WK9 346 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 CEP97Q8IW35 865 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 NKAPQ8N5F7 415 aaKnown RBP20.2■□□□□ 0.82
PNKP-209ENST00000596726 ANKRD7Q92527 254 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 FAM129AQ9BZQ8 928 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 POPDC3Q9HBV1 291 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 DHCR7Q9UBM7 475 aaKnown RBP20.2■□□□□ 0.82
PNKP-209ENST00000596726 IKZF3Q9UKT9 509 aa20.2■□□□□ 0.82
PNKP-209ENST00000596726 MTO1Q9Y2Z2 717 aaKnown RBP20.2■□□□□ 0.82
PNKP-209ENST00000596726 FITM1A5D6W6 292 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 GP5P40197 560 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 ARSFP54793 590 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 AP1S2P56377 157 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 POU4F1Q01851 419 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 RELAQ04206 551 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 ZNF460Q14592 562 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 ZXDCQ2QGD7 858 aaPredicted RBP20.19■□□□□ 0.82
PNKP-209ENST00000596726 KBTBD12Q3ZCT8 623 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 YOD1Q5VVQ6 348 aaPredicted RBP20.19■□□□□ 0.82
PNKP-209ENST00000596726 FRMPD2BQ6IN97 320 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 AGTRAPQ6RW13 159 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 SBSNQ6UWP8 590 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 SYVN1Q86TM6 617 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 ENDOVQ8N8Q3 282 aaKnown RBP20.19■□□□□ 0.82
PNKP-209ENST00000596726 RBBP8Q99708 897 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 ZFYVE21Q9BQ24 234 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 NDC1Q9BTX1 674 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 SEMA4CQ9C0C4 833 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 IRAK4Q9NWZ3 460 aa20.19■□□□□ 0.82
PNKP-209ENST00000596726 NOVA2Q9UNW9 492 aaKnown RBP20.19■□□□□ 0.82
PNKP-209ENST00000596726 COL6A6A6NMZ7 2263 aa20.18■□□□□ 0.82
PNKP-209ENST00000596726 LOC105369274A0A096LPK9 316 aa20.18■□□□□ 0.82
PNKP-209ENST00000596726 LOC102723532A0A0G2JNH3 316 aa20.18■□□□□ 0.82
PNKP-209ENST00000596726 A0A0J9YVX5 310 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms