RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 KPNA5O15131 536 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 CD3EAPO15446 510 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 HNRNPRO43390 633 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 NDUFS3O75489 264 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 JRKO75564 520 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 MED26O95402 600 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 C1orf105O95561 183 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 ZGLP1P0C6A0 271 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 ERVK-10P10266 1014 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 ETS1P14921 441 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 ACPPP15309 386 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 FBLP22087 321 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 CXCR2P25025 360 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 TNFRSF8P28908 595 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 SESN2P58004 480 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 KIF5AQ12840 1032 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 SNX1Q13596 522 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 TSTA3Q13630 321 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 MUM1Q2TAK8 710 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 CCSMST1Q4G0I0 132 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 VWA2Q5GFL6 755 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 PCID2Q5JVF3 399 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 RPUSD3Q6P087 351 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 PRMT9Q6P2P2 845 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 CNSTQ6PJW8 725 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 PRUNE1Q86TP1 453 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 KBTBD2Q8IY47 623 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 OR4N4Q8N0Y3 316 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 TXLNBQ8N3L3 684 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 OR2L3Q8NG85 312 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 C1orf54Q8WWF1 131 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 PEX13Q92968 403 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 MESP1Q9BRJ9 268 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 PLA2G3Q9NZ20 509 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 PTGFRNQ9P2B2 879 aa10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 MARCH4Q9P2E8 410 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 RUVBL2Q9Y230 463 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-202ENST00000596708 CACNA1CQ13936 2221 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 KRT87PA6NCN2 255 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 LIASO43766 372 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 NRP2O60462 931 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 WFS1O76024 890 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 USP1O94782 785 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 APRTP07741 180 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 CMPK1P30085 196 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 CCNFP41002 786 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 ZNF75DP51815 510 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 EMP2P54851 167 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 EIF3BP55884 814 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 FASTKQ14296 549 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 OASLQ15646 514 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 FAAH2Q6GMR7 532 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 FBXO42Q6P3S6 717 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 NDUFAF7Q7L592 441 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 CCDC89Q8N998 374 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 OR2A1Q8NGT9 310 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 BRIX1Q8TDN6 353 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 HES6Q96HZ4 224 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 CABS1Q96KC9 395 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 ZFYVE21Q9BQ24 234 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 DPH7Q9BTV6 452 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 ACAT2Q9BWD1 397 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 FRMD8P1Q9BZ68 369 aaPredicted RBP10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 PAK5Q9P286 719 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 COPG2Q9UBF2 871 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 CDC14AQ9UNH5 594 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 ENTPD4Q9Y227 616 aa10.07□□□□□ -0.8
CHMP2A-202ENST00000596708 TRAV17A0A0B4J275 112 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 A0A0U1RQJ8 604 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 A0A1W2PPV9 198 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 H0YGG7 62 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 FFAR3O14843 346 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 GPR42O15529 346 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 PRPF4O43172 522 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 F10P00742 488 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 HEXBP07686 556 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 STSP08842 583 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 PRR35P0CG20 571 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 RPS3P23396 243 aaKnown RBP eCLIP10.06□□□□□ -0.83e-6■■■□□ 16.9
CHMP2A-202ENST00000596708 NMBRP28336 390 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 FMO4P31512 558 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 KCNK10P57789 538 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 ARF3P61204 181 aaPredicted RBP10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 YBX1P67809 324 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 CRADDP78560 199 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 EEF1A2Q05639 463 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 NAA25Q14CX7 972 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 ATG9BQ674R7 924 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 RNF44Q7L0R7 432 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 LRRC6Q86X45 466 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 SIRT6Q8N6T7 355 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 HMGCLL1Q8TB92 370 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 MOCOSQ96EN8 888 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 MMABQ96EY8 250 aaPredicted RBP10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 BAG1Q99933 345 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms