RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TAC3Q9UHF0 121 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 SLC22A14Q9Y267 594 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 MSRB2Q9Y3D2 182 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 NEUROG3Q9Y4Z2 214 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 CCDC187A0A096LP49 1063 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 A0A1B0GTL3 188 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 NCF1BA6NI72 391 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 NCF1CA8MVU1 366 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 ZW10O43264 779 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 LCMT2O60294 686 aaKnown RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 PLIN3O60664 434 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 SIX3O95343 332 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 TIAF1O95411 115 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ZBTB11O95625 1053 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 GSTA1P08263 222 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ANXA5P08758 320 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 RBP1P09455 135 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 HIST1H2AGP0C0S8 130 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 MSL3P1P0C860 447 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 EBLN1P0CF75 366 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 NCF1P14598 390 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 CD22P20273 847 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 HIST1H2ADP20671 130 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 HSPA7P48741 367 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 HNMTP50135 292 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 CSNK1G2P78368 415 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 IFFO1Q0D2I5 559 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 SETDB1Q15047 1291 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 PCBP2Q15366 365 aaKnown RBP eCLIP10.16□□□□□ -0.78
LIG1-210ENST00000596332 SF1Q15637 639 aaKnown RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 KRT71Q3SY84 523 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 TAF1BQ53T94 588 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 CEP85LQ5SZL2 805 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 FIGLAQ6QHK4 219 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 IGF2-ASQ6U949 168 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 RAB11FIP2Q7L804 512 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ERMP1Q7Z2K6 904 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 LCA5Q86VQ0 697 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 THOC6Q86W42 341 aaKnown RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 FAM129CQ86XR2 697 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 KMT5CQ86Y97 462 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 SYTL1Q8IYJ3 562 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ABHD11Q8NFV4 315 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 NEIL2Q969S2 332 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 SLC22A18Q96BI1 424 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ARL8AQ96BM9 186 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ZNF501Q96CX3 271 aaPredicted RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 HIST1H2AHQ96KK5 128 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 SLC46A1Q96NT5 459 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 HIST1H2AJQ99878 128 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 MRPL57Q9BQC6 102 aaKnown RBP10.16□□□□□ -0.78
LIG1-210ENST00000596332 PLCD4Q9BRC7 762 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 H2AFJQ9BTM1 129 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 TRIM54Q9BYV2 358 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 CD244Q9BZW8 370 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 NRSN2Q9GZP1 204 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ZBTB26Q9HCK0 441 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 ACSS2Q9NR19 701 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 FBXO8Q9NRD0 319 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 NUDT4Q9NZJ9 180 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 DCDC2Q9UHG0 476 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 RNF112Q9ULX5 631 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 SATB2Q9UPW6 733 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 PLLPQ9Y342 182 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 LOXL2Q9Y4K0 774 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 PCDHB11Q9Y5F2 797 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 PCDHGA8Q9Y5G5 932 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 FREM2Q5SZK8 3169 aa10.16□□□□□ -0.78
LIG1-210ENST00000596332 LOC105369274A0A096LPK9 316 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 LOC102723532A0A0G2JNH3 316 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 A8MT66 165 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 CDRT15L2A8MXV6 281 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 B4E171 279 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 C9orf172C9J069 976 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 H7BY64 318 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 PPP6CO00743 305 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 PLD2O14939 933 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 KDM1AO60341 852 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 DXOO77932 396 aaKnown RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 FKBP9O95302 570 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 MED26O95402 600 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 TBX6O95947 436 aaPredicted RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 KRT15P19012 456 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 CDH3P22223 829 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 TSPAN7P41732 249 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 ETV4P43268 484 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 HSD11B2P80365 405 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 RELAQ04206 551 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 PRKAA1Q13131 559 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 GPR19Q15760 415 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 PFKFB4Q16877 469 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 TSNAXIP1Q2TAA8 658 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 CATSPEREQ5SY80 951 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 PRAMEF17Q5VTA0 474 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 CES4AQ5XG92 561 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 FRMPD2BQ6IN97 320 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 SLCO4C1Q6ZQN7 724 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 RPS27LQ71UM5 84 aaKnown RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 SRRM1Q8IYB3 904 aaKnown RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 OR4N4Q8N0Y3 316 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms