RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 IKBKGQ9Y6K9 419 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 PKD1L2Q7Z442 2459 aa16.6■□□□□ 0.25
SHKBP1-212ENST00000596163 ZNF891A8MT65 544 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 MEN1O00255 615 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 TCN2P20062 427 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 AGXTP21549 392 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 ECHS1P30084 290 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 PGGT1BP53609 377 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 ARSFP54793 590 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 ATP6V0D1P61421 351 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 RPS15P62841 145 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 RHDQ02161 417 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 RELAQ04206 551 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 ZNF460Q14592 562 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 PHKG1Q16816 387 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 DEFB110Q30KQ9 67 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 YOD1Q5VVQ6 348 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 CAPN13Q6MZZ7 669 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 FRA10AC1Q70Z53 315 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 CCDC91Q7Z6B0 441 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 FBXL8Q96CD0 374 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 C17orf62Q9BQA9 187 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 SELENOSQ9BQE4 189 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 HAUS8Q9BT25 410 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 GPR87Q9BY21 358 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 CAB39LQ9H9S4 337 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 TXLNGQ9NUQ3 528 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 CROTQ9UKG9 612 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 PCDHGA4Q9Y5G9 962 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 WDFY3Q8IZQ1 3526 aa16.59■□□□□ 0.25
SHKBP1-212ENST00000596163 A0A087WUV0 522 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 OR2A25A4D2G3 310 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 ZSCAN9O15535 394 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 ACSL3O95573 720 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 ANXA5P08758 320 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 CCDC166P0CW27 439 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 CDKL1Q00532 357 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 NAE1Q13564 534 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 GRM7Q14831 915 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 ZKSCAN8Q15776 578 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 UAP1Q16222 522 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 PRAMEF13Q5VWM6 474 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 TRMT10CQ7L0Y3 403 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 TAOK1Q7L7X3 1001 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 DSELQ8IZU8 1212 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 EIF1ADQ8N9N8 165 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 TTC29Q8NA56 475 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 PROKR1Q8TCW9 393 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 ANKRD49Q8WVL7 239 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 MRRFQ96E11 262 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 RNF31Q96EP0 1072 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 MED8Q96G25 268 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 CRELD1Q96HD1 420 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 ATG10Q9H0Y0 220 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 TMEM184CQ9NVA4 438 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 OARD1Q9Y530 152 aa16.58■□□□□ 0.24
SHKBP1-212ENST00000596163 NPEPPSL1A6NEC2 478 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 CDC7O00311 574 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 PHGDHO43175 533 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 KATNA1O75449 491 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 FAM155BO75949 473 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 GUCA1CO95843 209 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 RECKO95980 971 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 INHBAP08476 426 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 CD63P08962 238 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 SLC26A3P40879 764 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 HNMTP50135 292 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 TBPL1P62380 186 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 GPS2Q13227 327 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 SRSF6Q13247 344 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 DNASE1L3Q13609 305 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 FAM214AQ32MH5 1076 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 PRAMEF17Q5VTA0 474 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 RHBDD2Q6NTF9 364 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 LCTLQ6UWM7 567 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 SBSNQ6UWP8 590 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 RNF44Q7L0R7 432 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 ADCK2Q7Z695 626 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 TBC1D1Q86TI0 1168 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 C17orf64Q86WR6 236 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 ZNF655Q8N720 491 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 CT55Q8WUE5 264 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 ALKBH8Q96BT7 664 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 EGFL8Q99944 293 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 ZFYVE21Q9BQ24 234 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 SGPP1Q9BX95 441 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 SLC6A20Q9NP91 592 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 ENAMQ9NRM1 1142 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 PCMTD2Q9NV79 361 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 TLK1Q9UKI8 766 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 PCDHGA6Q9Y5G7 932 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 SDK2Q58EX2 2172 aa16.57■□□□□ 0.24
SHKBP1-212ENST00000596163 A0A0J9YVX5 310 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 H3BMH7 237 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 TXNDC9O14530 226 aa16.56■□□□□ 0.24
SHKBP1-212ENST00000596163 HCRTR1O43613 425 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms