RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ANAPC2Q9UJX6 822 aa17.01■□□□□ 0.31
SHKBP1-204ENST00000594862 KLHL20Q9Y2M5 609 aa17.01■□□□□ 0.31
SHKBP1-204ENST00000594862 OR2A25A4D2G3 310 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 FITM1A5D6W6 292 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 J3QKU1 62 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 DSCR3O14972 297 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 FANCGO15287 622 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 EIF3HO15372 352 aaKnown RBP eCLIP17■□□□□ 0.31
SHKBP1-204ENST00000594862 AHSGP02765 367 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 EZRP15311 586 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 HRH2P25021 359 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 PSMB5P28074 263 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 FOLR3P41439 243 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 RPL21P46778 160 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 GCGRP47871 477 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 EMP3P54852 163 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 PRDX1Q06830 199 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 MGAT5Q09328 741 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 PDIA2Q13087 525 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 PDAP1Q13442 181 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 ICE2Q659A1 982 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 LCN10Q6JVE6 187 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 TCTN3Q6NUS6 607 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 PRICKLE2Q7Z3G6 844 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 PIWIL4Q7Z3Z4 852 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 SLC26A11Q86WA9 606 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 IGDCC3Q8IVU1 814 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 TMEM102Q8N9M5 508 aaPredicted RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 ZNF480Q8WV37 535 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 NACC2Q96BF6 587 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 ABHD17AQ96GS6 310 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 CCDC138Q96M89 665 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 PHACTR1Q9C0D0 580 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 RAB17Q9H0T7 212 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 ACSS2Q9NR19 701 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 CUTCQ9NTM9 273 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 DHCR7Q9UBM7 475 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 NXT1Q9UKK6 140 aaKnown RBP17■□□□□ 0.31
SHKBP1-204ENST00000594862 MAST4O15021 2626 aa17■□□□□ 0.31
SHKBP1-204ENST00000594862 NAV2Q8IVL1 2488 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 E7ENX8 843 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 TXNDC9O14530 226 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 ONECUT2O95948 504 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 ALBP02768 609 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 F7P08709 466 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 HIST1H2AGP0C0S8 130 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 HIST1H2ADP20671 130 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 CCND1P24385 295 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 IL2P60568 153 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 CAV1Q03135 178 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 TAP2Q03519 686 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 CKAP4Q07065 602 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 TSTA3Q13630 321 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 FASTKQ14296 549 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 SSPNQ14714 243 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 THEMIS2Q5TEJ8 643 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 C1orf189Q5VU69 101 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 MLIPQ5VWP3 458 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 CYHR1Q6ZMK1 362 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 TTLL10Q6ZVT0 673 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 MED25Q71SY5 747 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 FBXO36Q8NEA4 188 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 OR2Y1Q8NGV0 311 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 HIST1H2AHQ96KK5 128 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 HIST1H2AJQ99878 128 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 H2AFJQ9BTM1 129 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 ACAT2Q9BWD1 397 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 WDR54Q9H977 334 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 PARVBQ9HBI1 364 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 CCDC177Q9NQR7 707 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 TAC3Q9UHF0 121 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 SNX24Q9Y343 169 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 UTP11Q9Y3A2 253 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 SPTBP11277 2137 aa16.99■□□□□ 0.31
SHKBP1-204ENST00000594862 KRT87PA6NCN2 255 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 PRPF4O43172 522 aaKnown RBP eCLIP16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 KLHL41O60662 606 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 CTSVO60911 334 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 ALAS2P22557 587 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 GABRB3P28472 473 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 AP1S2P56377 157 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 VSX2P58304 361 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 MUM1Q2TAK8 710 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 HP1BP3Q5SSJ5 553 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 HECTD2Q5U5R9 776 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 PRMT9Q6P2P2 845 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 PAQR3Q6TCH7 311 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 SUSD1Q6UWL2 747 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 SYT10Q6XYQ8 523 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 PAQR7Q86WK9 346 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 HPS6Q86YV9 775 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 ZBED8Q8IZ13 594 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 GPATCH11Q8N954 259 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 EEF1AKMT1Q8WVE0 214 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 RERGQ96A58 199 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 PTERQ96BW5 349 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 LINGO1Q96FE5 620 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 VPS50Q96JG6 964 aa16.98■□□□□ 0.31
SHKBP1-204ENST00000594862 TRIM54Q9BYV2 358 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms