RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 PCDHGB5Q9Y5G0 923 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 FEZF1A0PJY2 475 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 BPNT1O95861 308 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 C22orf39Q6P5X5 142 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 TRMT10BQ6PF06 316 aaKnown RBP17.79■□□□□ 0.44
SYNM-204ENST00000594047 ZBTB8BQ8NAP8 495 aaPredicted RBP17.79■□□□□ 0.44
SYNM-204ENST00000594047 ZFRQ96KR1 1074 aaKnown RBP17.79■□□□□ 0.44
SYNM-204ENST00000594047 ZSWIM3Q96MP5 696 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 OR51B6Q9H340 312 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 ITGA5P08648 1049 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 TPSB2P20231 275 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 CLRN1P58418 232 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 RPS14P62263 151 aaKnown RBP17.79■□□□□ 0.44
SYNM-204ENST00000594047 ELF3P78545 371 aaPredicted RBP17.79■□□□□ 0.44
SYNM-204ENST00000594047 CSTF1Q05048 431 aaKnown RBP17.79■□□□□ 0.44
SYNM-204ENST00000594047 TPSAB1Q15661 275 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 BMT2Q1RMZ1 405 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 SLC13A3Q8WWT9 602 aa17.79■□□□□ 0.44
SYNM-204ENST00000594047 ALOX15BO15296 676 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 GRID2O43424 1007 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SYNGR4O95473 234 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 RPS13P62277 151 aaKnown RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 DENND5AQ6IQ26 1287 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 GPR153Q6NV75 609 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 FSTL5Q8N475 847 aaPredicted RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 FEM1AQ9BSK4 669 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SDCBP2Q9H190 292 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 STOML2Q9UJZ1 356 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 GRIP1Q9Y3R0 1128 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 PCDHGA11Q9Y5H2 935 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 COCHO43405 550 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 MTHFD1P11586 935 aaKnown RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 MAP3K8P41279 467 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 RASGEF1BQ0VAM2 473 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SWI5Q1ZZU3 235 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 ZNF101Q8IZC7 436 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 TRMT10AQ8TBZ6 339 aaKnown RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 ZFP3Q96NJ6 502 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 C17orf62Q9BQA9 187 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 ZSCAN5AQ9BUG6 496 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 UBAP1Q9NZ09 502 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 IGLON5A6NGN9 336 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 JAG1P78504 1218 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 PPP1R8Q12972 351 aaKnown RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 ELOCQ15369 112 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 RBM44Q6ZP01 1051 aaKnown RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 PGM2Q96G03 612 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 B3GAT2Q9NPZ5 323 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 IFT80Q9P2H3 777 aaPredicted RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 RHCGQ9UBD6 479 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SOX1O00570 391 aaPredicted RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 LYPLA2O95372 231 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SOD2P04179 222 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 ITGB1P05556 798 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 PTDSS1P48651 473 aaKnown RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 KLHL26Q53HC5 615 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SLC9A4Q6AI14 798 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 AAGABQ6PD74 315 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 AMER2Q8N7J2 671 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 TWNKQ96RR1 684 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 MMADHCQ9H3L0 296 aaPredicted RBP17.78■□□□□ 0.44
SYNM-204ENST00000594047 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SMIM30A4D0T7 59 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 KLF10Q13118 480 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 ARFRP1Q13795 201 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 OR4F3Q6IEY1 312 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SLC39A5Q6ZMH5 540 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 NUDT13Q86X67 352 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 LRRC17Q8N6Y2 441 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SLC44A1Q8WWI5 657 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 LPGAT1Q92604 370 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 RAB11FIP5Q9BXF6 653 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 C1orf109Q9NX04 203 aa17.78■□□□□ 0.44
SYNM-204ENST00000594047 SNAI1O95863 264 aaPredicted RBP17.77■□□□□ 0.44
SYNM-204ENST00000594047 ADH1BP00325 375 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 SHISA6Q6ZSJ9 500 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 AMIGO3Q86WK7 504 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 CNDP2Q96KP4 475 aaKnown RBP17.77■□□□□ 0.44
SYNM-204ENST00000594047 RNF13O43567 381 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 AP3S1Q92572 193 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 CNTN3Q9P232 1028 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 UPB1Q9UBR1 384 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 DAPL1A0PJW8 107 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 ESR1P03372 595 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 TGFBR2P37173 567 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 ARF3P61204 181 aaPredicted RBP17.77■□□□□ 0.44
SYNM-204ENST00000594047 ARF1P84077 181 aaKnown RBP17.77■□□□□ 0.44
SYNM-204ENST00000594047 DEFB110Q30KQ9 67 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 LRTOMTQ8WZ04 291 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 GPATCH1Q9BRR8 931 aaKnown RBP17.77■□□□□ 0.44
SYNM-204ENST00000594047 PCDHGC3Q9UN70 934 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 PLEKHA6Q9Y2H5 1048 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 A0A0X1KG70 313 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 H7BY64 318 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 H7C0S8 307 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 EDNRAP25101 427 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 FMO3P31513 532 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 RAET1LQ5VY80 246 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 MBOAT1Q6ZNC8 495 aa17.77■□□□□ 0.44
SYNM-204ENST00000594047 PRAP1Q96NZ9 151 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms