RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ZNF282Q9UDV7 671 aaPredicted RBP22.84■■□□□ 1.25
LSM4-202ENST00000593564 ZC3H7BQ9UGR2 993 aaKnown RBP22.84■■□□□ 1.25
LSM4-202ENST00000593564 CREBBPQ92793 2442 aa22.84■■□□□ 1.25
LSM4-202ENST00000593564 MDC1Q14676 2089 aaKnown RBP22.84■■□□□ 1.25
LSM4-202ENST00000593564 CRYBG3Q68DQ2 2970 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 LOC105369274A0A096LPK9 316 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 LOC102723532A0A0G2JNH3 316 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 OR2A25A4D2G3 310 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 NRP2O60462 931 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 HPP00738 406 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 ARNTP27540 789 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 ATP5DP30049 168 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 BASP1P80723 227 aaKnown RBP22.83■■□□□ 1.25
LSM4-202ENST00000593564 KLC1Q07866 573 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 Q0VFX4 171 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 GBX1Q14549 363 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 TLR1Q15399 786 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 OR4N4Q8N0Y3 316 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 OTUD6BQ8N6M0 293 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 GRHL3Q8TE85 626 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 MIEF2Q96C03 454 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 THOC3Q96J01 351 aaKnown RBP22.83■■□□□ 1.25
LSM4-202ENST00000593564 ZFYVE21Q9BQ24 234 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 KIFC1Q9BW19 673 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 GUCA1BQ9UMX6 200 aa22.83■■□□□ 1.25
LSM4-202ENST00000593564 DRG1Q9Y295 367 aaKnown RBP22.83■■□□□ 1.25
LSM4-202ENST00000593564 CACNA1DQ01668 2161 aa22.83■■□□□ 1.24
LSM4-202ENST00000593564 E2F3O00716 465 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 MATN4O95460 622 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 ZGLP1P0C6A0 271 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 ACPPP15309 386 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 CDC16Q13042 620 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 RPS6KA1Q15418 735 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 TYSND1Q2T9J0 566 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 MUM1Q2TAK8 710 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 RNF187Q5TA31 235 aaPredicted RBP22.82■■□□□ 1.24
LSM4-202ENST00000593564 MRNIPQ6NTE8 343 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 ISLR2Q6UXK2 745 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 LPGAT1Q92604 370 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 MFSD3Q96ES6 412 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 CNDP1Q96KN2 507 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 C10orf90Q96M02 699 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 LMF1Q96S06 567 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 MESP1Q9BRJ9 268 aa22.82■■□□□ 1.24
LSM4-202ENST00000593564 IGLV3-12A0A075B6K2 115 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 H3BMM5 538 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 MAP2K7O14733 419 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 VAPBO95292 243 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 EIF2S1P05198 315 aaKnown RBP22.81■■□□□ 1.24
LSM4-202ENST00000593564 ERVK-10P10266 1014 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 ERGP11308 486 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 CMPK1P30085 196 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 EMP3P54852 163 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 ADARP55265 1226 aaKnown RBP22.81■■□□□ 1.24
LSM4-202ENST00000593564 MFAP5Q13361 173 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 FASTKQ14296 549 aaKnown RBP22.81■■□□□ 1.24
LSM4-202ENST00000593564 PRTGQ2VWP7 1150 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 MEI1Q5TIA1 1274 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 ATG9BQ674R7 924 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 FBXO42Q6P3S6 717 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 SDCCAG8Q86SQ7 713 aaPredicted RBP22.81■■□□□ 1.24
LSM4-202ENST00000593564 FAR1Q8WVX9 515 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 TCF12Q99081 682 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 DPH7Q9BTV6 452 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 SYBUQ9NX95 663 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 C3orf18Q9UK00 162 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 ZKSCAN5Q9Y2L8 839 aa22.81■■□□□ 1.24
LSM4-202ENST00000593564 PFDN6O15212 129 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 PHF2O75151 1096 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 NIPSNAP2O75323 286 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 ESR1P03372 595 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 EDN3P14138 238 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 FBLP22087 321 aaKnown RBP22.8■■□□□ 1.24
LSM4-202ENST00000593564 MGAT1P26572 445 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 CDC25BP30305 580 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 FMO4P31512 558 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 YBX1P67809 324 aaKnown RBP22.8■■□□□ 1.24
LSM4-202ENST00000593564 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.8■■□□□ 1.24
LSM4-202ENST00000593564 LRRC8BQ6P9F7 803 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 LINC00696Q6ZRV3 163 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 PRSS58Q8IYP2 241 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 OR9A1PQ8NGU1 263 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 ACAT2Q9BWD1 397 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 ZNF160Q9HCG1 818 aa22.8■■□□□ 1.24
LSM4-202ENST00000593564 H0YGG7 62 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 MYO1CO00159 1063 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 KLHL18O94889 574 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 ARF3P61204 181 aaPredicted RBP22.79■■□□□ 1.24
LSM4-202ENST00000593564 CDK16Q00536 496 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 ANKRD20A4Q4UJ75 823 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 CES3Q6UWW8 571 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 GSTA5Q7RTV2 222 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 KBTBD2Q8IY47 623 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 SPC24Q8NBT2 197 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 SMPDL3AQ92484 453 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 C8orf44Q96CB5 159 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 MVB12AQ96EY5 273 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 CABS1Q96KC9 395 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 PLCD4Q9BRC7 762 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 STOX2Q9P2F5 926 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms