RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ENO3P13929 434 aaPredicted RBP10□□□□□ -0.81
SDF2-208ENST00000589788 ZNF28P17035 718 aa10□□□□□ -0.81
SDF2-208ENST00000589788 GSTT1P30711 240 aa10□□□□□ -0.81
SDF2-208ENST00000589788 CBSP35520 551 aa10□□□□□ -0.81
SDF2-208ENST00000589788 SKIV2L2P42285 1042 aaKnown RBP10□□□□□ -0.81
SDF2-208ENST00000589788 PLTPP55058 493 aa10□□□□□ -0.81
SDF2-208ENST00000589788 MGAT5Q09328 741 aa10□□□□□ -0.81
SDF2-208ENST00000589788 ABHD18Q0P651 414 aa10□□□□□ -0.81
SDF2-208ENST00000589788 SRSF6Q13247 344 aaKnown RBP10□□□□□ -0.81
SDF2-208ENST00000589788 MAP7Q14244 749 aa10□□□□□ -0.81
SDF2-208ENST00000589788 FRG1Q14331 258 aaKnown RBP10□□□□□ -0.81
SDF2-208ENST00000589788 GRB7Q14451 532 aa10□□□□□ -0.81
SDF2-208ENST00000589788 FASTKD3Q14CZ7 662 aaKnown RBP10□□□□□ -0.81
SDF2-208ENST00000589788 TEDDM1Q5T9Z0 273 aa10□□□□□ -0.81
SDF2-208ENST00000589788 LRRC8EQ6NSJ5 796 aa10□□□□□ -0.81
SDF2-208ENST00000589788 PWWP2BQ6NUJ5 590 aa10□□□□□ -0.81
SDF2-208ENST00000589788 TRMT10BQ6PF06 316 aaKnown RBP10□□□□□ -0.81
SDF2-208ENST00000589788 INO80CQ6PI98 192 aaPredicted RBP10□□□□□ -0.81
SDF2-208ENST00000589788 NEK10Q6ZWH5 1172 aa10□□□□□ -0.81
SDF2-208ENST00000589788 GALNT7Q86SF2 657 aa10□□□□□ -0.81
SDF2-208ENST00000589788 TAX1BP1Q86VP1 789 aa10□□□□□ -0.81
SDF2-208ENST00000589788 TMEM126BQ8IUX1 230 aa10□□□□□ -0.81
SDF2-208ENST00000589788 PALM2Q8IXS6 379 aa10□□□□□ -0.81
SDF2-208ENST00000589788 GPATCH11Q8N954 259 aa10□□□□□ -0.81
SDF2-208ENST00000589788 C19orf47Q8N9M1 422 aaKnown RBP10□□□□□ -0.81
SDF2-208ENST00000589788 GALNT6Q8NCL4 622 aa10□□□□□ -0.81
SDF2-208ENST00000589788 GIMAP7Q8NHV1 300 aa10□□□□□ -0.81
SDF2-208ENST00000589788 FBXO25Q8TCJ0 367 aa10□□□□□ -0.81
SDF2-208ENST00000589788 CD200R1Q8TD46 325 aa10□□□□□ -0.81
SDF2-208ENST00000589788 IFT81Q8WYA0 676 aa10□□□□□ -0.81
SDF2-208ENST00000589788 TCTN2Q96GX1 697 aa10□□□□□ -0.81
SDF2-208ENST00000589788 WDR83Q9BRX9 315 aaKnown RBP10□□□□□ -0.81
SDF2-208ENST00000589788 SPRY4Q9C004 299 aa10□□□□□ -0.81
SDF2-208ENST00000589788 BHLHE41Q9C0J9 482 aaPredicted RBP10□□□□□ -0.81
SDF2-208ENST00000589788 GPN2Q9H9Y4 310 aaPredicted RBP10□□□□□ -0.81
SDF2-208ENST00000589788 SAYSD1Q9NPB0 183 aa10□□□□□ -0.81
SDF2-208ENST00000589788 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10□□□□□ -0.81
SDF2-208ENST00000589788 SERTAD3Q9UJW9 196 aa10□□□□□ -0.81
SDF2-208ENST00000589788 ZZEF1O43149 2961 aa10□□□□□ -0.81
SDF2-208ENST00000589788 FAM208BQ5VWN6 2430 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 EIF3FO00303 357 aaPredicted RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 PSIP1O75475 530 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 SNRNP200O75643 2136 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 SCRG1O75711 98 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 MPC1LP0DKB6 136 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 MYBL2P10244 700 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 LIFP15018 202 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 GABRB3P28472 473 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 RGS4P49798 205 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 SF1Q15637 639 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 SLC5A12Q1EHB4 618 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 CCSMST1Q4G0I0 132 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 RBM20Q5T481 1227 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 TIPARPQ7Z3E1 657 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 CCDC25Q86WR0 208 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 CPNE9Q8IYJ1 553 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 GPR135Q8IZ08 494 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 LINC01555Q8NAE3 123 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 OR9A1PQ8NGU1 263 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 ZNF501Q96CX3 271 aaPredicted RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 MENTQ9BUN1 341 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 EFHD1Q9BUP0 239 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 RASSF4Q9H2L5 321 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 PLAC1Q9HBJ0 212 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 INTS7Q9NVH2 962 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 NSMCE4AQ9NXX6 385 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 SPATA7Q9P0W8 599 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 SLC17A6Q9P2U8 582 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 MTRF1LQ9UGC7 380 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 RALYQ9UKM9 306 aaKnown RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 CORO1CQ9ULV4 474 aaPredicted RBP9.99□□□□□ -0.81
SDF2-208ENST00000589788 NFU1Q9UMS0 254 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 MED16Q9Y2X0 877 aa9.99□□□□□ -0.81
SDF2-208ENST00000589788 CCDC151A5D8V7 595 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 KRT87PA6NCN2 255 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 PABPN1LA6NDY0 278 aaKnown RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 ZNF839A8K0R7 811 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 ARHGEF33A8MVX0 844 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 ZBTB14O43829 449 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 FKBP9O95302 570 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 TIAF1O95411 115 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 SYF2O95926 243 aaKnown RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 NTRK1P04629 796 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 MSL3P1P0C860 447 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 ARAFP10398 606 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 CYP2A7P20853 494 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 OAS2P29728 719 aaKnown RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 PEBP1P30086 187 aaKnown RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 HSD17B2P37059 387 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 STAT5AP42229 794 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 CDKN2DP55273 166 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 ITGA1P56199 1179 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 RHDQ02161 417 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 TSTA3Q13630 321 aaPredicted RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.98□□□□□ -0.81
SDF2-208ENST00000589788 HECTD2Q5U5R9 776 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 FAM45BPQ6NSW5 357 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 CDHR3Q6ZTQ4 885 aa9.98□□□□□ -0.81
SDF2-208ENST00000589788 CEP128Q6ZU80 1094 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms