RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 BTRCQ9Y297 605 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 NEUROG3Q9Y4Z2 214 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 EFCAB7A8K855 629 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 COPEO14579 308 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 MAP2K7O14733 419 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 FKBP9O95302 570 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 CCL4P13236 92 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 ITIH1P19827 911 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 GRIA3P42263 894 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 GDF5P43026 501 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 HSPA7P48741 367 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 ARL4DP49703 201 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 HSD11B2P80365 405 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 PRDX1Q06830 199 aaKnown RBP18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 EIF3IQ13347 325 aaKnown RBP18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 FOXR1Q6PIV2 292 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 LCTLQ6UWM7 567 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 CROCCP2Q86T23 111 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 FBXO39Q8N4B4 442 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 RUFY1Q96T51 708 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 MRPS30Q9NP92 439 aaKnown RBP18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 CUEDC1Q9NWM3 386 aaPredicted RBP18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 EMCNQ9ULC0 261 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 ASB1Q9Y576 335 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 ASPMQ8IZT6 3477 aa18.26■□□□□ 0.51
CLPTM1-209ENST00000588855 IGKV1-8A0A0C4DH67 115 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 PLD2O14939 933 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 KLK8O60259 260 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 NRP2O60462 931 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 WDR47O94967 919 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 CCNDBP1O95273 360 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 EBLN1P0CF75 366 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 GFAPP14136 432 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 CREB1P16220 341 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 CRHR1P34998 444 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 GGT5P36269 586 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 ETV5P41161 510 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 MLLT3P42568 568 aaPredicted RBP18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 AGTR2P50052 363 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 FCRL6Q6DN72 434 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 FIGLAQ6QHK4 219 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 ERMP1Q7Z2K6 904 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 THOC6Q86W42 341 aaKnown RBP18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 KLHDC8AQ8IYD2 350 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 D2HGDHQ8N465 521 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 BMPERQ8N8U9 685 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 APOPT1Q96IL0 206 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 DPH7Q9BTV6 452 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 PCBD2Q9H0N5 130 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 C12orf65Q9H3J6 166 aaKnown RBP18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 FAM60AQ9NP50 221 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 MKS1Q9NXB0 559 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 SLC22A14Q9Y267 594 aa18.25■□□□□ 0.51
CLPTM1-209ENST00000588855 TARM1B6A8C7 271 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 IPO13O94829 963 aaKnown RBP18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 FGF3P11487 239 aaPredicted RBP18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 FOLR1P15328 257 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 NPPBP16860 134 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 CCT5P48643 541 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 GABREP78334 506 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 ABATP80404 500 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 SETDB1Q15047 1291 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 PFKFB4Q16877 469 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 TNFAIP8L3Q5GJ75 292 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 HDXQ7Z353 690 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 BANPQ8N9N5 519 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 UBTD2Q8WUN7 234 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 PGM2Q96G03 612 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 PRR11Q96HE9 360 aaPredicted RBP18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 HAUS8Q9BT25 410 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 CNOT10Q9H9A5 744 aaKnown RBP18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 PDE7BQ9NP56 450 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 PISDQ9UG56 409 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 MSRB2Q9Y3D2 182 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 FREM2Q5SZK8 3169 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 FRYQ5TBA9 3013 aa18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 MDC1Q14676 2089 aaKnown RBP18.24■□□□□ 0.51
CLPTM1-209ENST00000588855 SPAG7O75391 227 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 STK16O75716 305 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 JMJD7P0C870 316 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 MYZAPP0CAP1 466 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 ALDH18A1P54886 795 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 DEFB110Q30KQ9 67 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 C17orf64Q86WR6 236 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 PTGR2Q8N8N7 351 aaPredicted RBP18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 PHF21BQ96EK2 531 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 TCTN2Q96GX1 697 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 SMC6Q96SB8 1091 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 POLR1BQ9H9Y6 1135 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 GRID1Q9ULK0 1009 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 KLK4Q9Y5K2 254 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 LRRC14BA6NHZ5 514 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 AGPSO00116 658 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 CCNT2O60583 730 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 SMIM24O75264 130 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 PROCP04070 461 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 CDH1P12830 882 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 MAPK10P53779 464 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 GPR19Q15760 415 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 TMTC4Q5T4D3 741 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms