RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 G3BP2Q9UN86 482 aaKnown RBP13.84□□□□□ -0.19
DDX39A-208ENST00000588692 PTRH2Q9Y3E5 179 aaKnown RBP13.84□□□□□ -0.19
DDX39A-208ENST00000588692 PCDHGB7Q9Y5F8 929 aa13.84□□□□□ -0.19
DDX39A-208ENST00000588692 HEATR5BQ9P2D3 2071 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 NUP210LQ5VU65 1888 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 E7ENX8 843 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 TTI1O43156 1089 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 CEACAM4O75871 244 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 SEC31AO94979 1220 aaKnown RBP13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ALBP02768 609 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ALAS2P22557 587 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ELK3P41970 407 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 CSRP3P50461 194 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 PGDP52209 483 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ARL4CP56559 192 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 VSX2P58304 361 aaPredicted RBP13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ABATP80404 500 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 TAP2Q03519 686 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 TLE1Q04724 770 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 PRDX1Q06830 199 aaKnown RBP13.83□□□□□ -0.2
DDX39A-208ENST00000588692 CHAF1BQ13112 559 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 SP140Q13342 867 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ATP1A4Q13733 1029 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ICE2Q659A1 982 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 SUSD1Q6UWL2 747 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 CYHR1Q6ZMK1 362 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 MRGPREQ86SM8 312 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 NACC2Q96BF6 587 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ZFYVE21Q9BQ24 234 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 TRIM51Q9BSJ1 452 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 SLC25A23Q9BV35 468 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ACAT2Q9BWD1 397 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 EPN3Q9H201 632 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 SLC26A1Q9H2B4 701 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 WDR54Q9H977 334 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 MLXIPLQ9NP71 852 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 SLC6A20Q9NP91 592 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 TAC3Q9UHF0 121 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 CORO1CQ9ULV4 474 aaPredicted RBP13.83□□□□□ -0.2
DDX39A-208ENST00000588692 CHMP2BQ9UQN3 213 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 MED13Q9UHV7 2174 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 ANKRD12Q6UB98 2062 aa13.83□□□□□ -0.2
DDX39A-208ENST00000588692 UBR5O95071 2799 aaPredicted RBP13.83□□□□□ -0.2
DDX39A-208ENST00000588692 CCDC88CQ9P219 2028 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 A0A0J9YVX5 310 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 SYF2O95926 243 aaKnown RBP13.82□□□□□ -0.2
DDX39A-208ENST00000588692 C8GP07360 202 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 NR1D1P20393 614 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 MCM3P25205 808 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 OTX2P32243 289 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 CARSP49589 748 aaKnown RBP13.82□□□□□ -0.2
DDX39A-208ENST00000588692 CCL11P51671 97 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 ITGA8P53708 1063 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 RELAQ04206 551 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
DDX39A-208ENST00000588692 SLC9A5Q14940 896 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 WASHC2DQ5SRD0 308 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 STEAP4Q687X5 459 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 FRMPD2BQ6IN97 320 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 UBE2R2Q712K3 238 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-208ENST00000588692 PIWIL4Q7Z3Z4 852 aaKnown RBP13.82□□□□□ -0.2
DDX39A-208ENST00000588692 IGDCC3Q8IVU1 814 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 TEX19Q8NA77 164 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 PTERQ96BW5 349 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 NDNQ99608 321 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 TRIM4Q9C037 500 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 CLMPQ9H6B4 373 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 SLC22A11Q9NSA0 550 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 NXT1Q9UKK6 140 aaKnown RBP13.82□□□□□ -0.2
DDX39A-208ENST00000588692 TEX264Q9Y6I9 313 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 MYO18BQ8IUG5 2567 aa13.82□□□□□ -0.2
DDX39A-208ENST00000588692 HYKKA2RU49 373 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 K7EM74 188 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 PEX12O00623 359 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 CNOT3O75175 753 aaKnown RBP13.81□□□□□ -0.2
DDX39A-208ENST00000588692 AHSGP02765 367 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 EZRP15311 586 aaKnown RBP13.81□□□□□ -0.2
DDX39A-208ENST00000588692 ITGAXP20702 1163 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 GABRB3P28472 473 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 EMP3P54852 163 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 KCNC4Q03721 635 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 TSTA3Q13630 321 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-208ENST00000588692 TEDDM1Q5T9Z0 273 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 PRMT9Q6P2P2 845 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 OVCH1Q7RTY7 1134 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 PAQR7Q86WK9 346 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 HPS6Q86YV9 775 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 PALM2Q8IXS6 379 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 LRRC56Q8IYG6 542 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-208ENST00000588692 MYO1HQ8N1T3 1032 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 MCOLN3Q8TDD5 553 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 CFAP36Q96G28 342 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 FER1L6-AS2Q96M78 137 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 PLAC1Q9HBJ0 212 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 PPANQ9NQ55 473 aaKnown RBP13.81□□□□□ -0.2
DDX39A-208ENST00000588692 PCSK5Q92824 1860 aa13.81□□□□□ -0.2
DDX39A-208ENST00000588692 TNRC6AQ8NDV7 1962 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms