RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 RTN4Q9NQC3 1192 aaKnown RBP6.42□□□□□ -1.38
TPM4-210ENST00000588507 C14orf105Q9NVL8 296 aa6.42□□□□□ -1.38
TPM4-210ENST00000588507 TRMT1Q9NXH9 659 aaKnown RBP6.42□□□□□ -1.38
TPM4-210ENST00000588507 PKD2L2Q9NZM6 624 aa6.42□□□□□ -1.38
TPM4-210ENST00000588507 LIPT1Q9Y234 373 aa6.42□□□□□ -1.38
TPM4-210ENST00000588507 IGHV3-20A0A0C4DH32 117 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 A0A0J9YY10 115 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 A0A0J9YYE9 177 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 RBMY1BA6NDE4 496 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 RBMY1EA6NEQ0 496 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 PPP1R12AO14974 1030 aaPredicted RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 SLC16A3O15427 465 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 POP7O75817 140 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 TGFAP01135 160 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 TRBC1P01850 177 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 RBMY1DP0C7P1 496 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 C8orf89P0DMQ9 161 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 FBLP22087 321 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 USF1P22415 310 aaPredicted RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 MCM3P25205 808 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 FMO4P31512 558 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 TRHRP34981 398 aaPredicted RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 FLT3P36888 993 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 PRKCIP41743 596 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 SNX16P57768 344 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 LOXL3P58215 753 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 HILS1P60008 231 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 HMGN5P82970 282 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 AMPD3Q01432 767 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 GTF2H3Q13889 308 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 NFE2L1Q14494 772 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 EXT1Q16394 746 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 CCDC14Q49A88 953 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 TCTE1Q5JU00 501 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 METRNLQ641Q3 311 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 CCBE1Q6UXH8 406 aaPredicted RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 KIAA0408Q6ZU52 694 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 UNC13DQ70J99 1090 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 REC114Q7Z4M0 266 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 CPEB2Q7Z5Q1 589 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 AMIGO1Q86WK6 493 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 ADGRF3Q8IZF5 1079 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 MRAPQ8TCY5 172 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 METTL21AQ8WXB1 218 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 RXFP2Q8WXD0 754 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 HSPBAP1Q96EW2 488 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 PSKH2Q96QS6 385 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 JMJD8Q96S16 334 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 LLPHQ9BRT6 129 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 MAGEB5Q9BZ81 275 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 EXO5Q9H790 373 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 UNKLQ9H9P5 680 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 MMP25Q9NPA2 562 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 GDF2Q9UK05 429 aaPredicted RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 PCDHB10Q9UN67 800 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 HEBP2Q9Y5Z4 205 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.41□□□□□ -1.38
TPM4-210ENST00000588507 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
TPM4-210ENST00000588507 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 MBD3L3A6NE82 208 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 AHRRA9YTQ3 701 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 SCAMP2O15127 329 aaKnown RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 EPB41L2O43491 1005 aaKnown RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 CALUO43852 315 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 RGS9O75916 674 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 PDHA1P08559 390 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 HKR1P10072 659 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 COL6A2P12110 1019 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 UGT2B7P16662 529 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 DPP4P27487 766 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 PSMC2P35998 433 aaKnown RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 PRCPP42785 496 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 CCR8P51685 355 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 ARFIP2P53365 341 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 MCCD1P59942 119 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 TMEM115Q12893 351 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 SF3B4Q15427 424 aaKnown RBP eCLIP6.4□□□□□ -1.382e-8■■■■□ 22.2
TPM4-210ENST00000588507 ACSF3Q4G176 576 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 NDUFAF5Q5TEU4 345 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 CNNM4Q6P4Q7 775 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 DEF8Q6ZN54 512 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 BNIPLQ7Z465 357 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 FAM109AQ8N4B1 249 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 SPDYE1Q8NFV5 336 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 MBD3L2Q8NHZ7 208 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 PROX1Q92786 737 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 KREMEN1Q96MU8 473 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 OR2A14Q96R47 310 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 NUDCD1Q96RS6 583 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 ZSCAN5AQ9BUG6 496 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 SLITRK2Q9H156 845 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 TFB2MQ9H5Q4 396 aaKnown RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 LRRC19Q9H756 370 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 NOD2Q9HC29 1040 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 KBTBD4Q9NVX7 518 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 TRPC4Q9UBN4 977 aa6.4□□□□□ -1.38
TPM4-210ENST00000588507 NKX1-2Q9UD57 310 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 C19orf25Q9UFG5 118 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 TMEFF2Q9UIK5 374 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 COQ4Q9Y3A0 265 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms