RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 FAM180AQ6UWF9 173 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 SUSD1Q6UWL2 747 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 KCNMB4Q86W47 210 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 OR4N4Q8N0Y3 316 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 STT3BQ8TCJ2 826 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 ZUFSPQ96AP4 578 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 P2RY12Q9H244 342 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 SLC26A1Q9H2B4 701 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 SYBUQ9NX95 663 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 ZNF282Q9UDV7 671 aaPredicted RBP13.09□□□□□ -0.31
HDAC5-208ENST00000588419 C3orf18Q9UK00 162 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 MRFAP1Q9Y605 127 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 E2F3O00716 465 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 KPNA5O15131 536 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 LRRTM2O43300 516 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 PRICKLE3O43900 615 aaPredicted RBP13.08□□□□□ -0.32
HDAC5-208ENST00000588419 VAPBO95292 243 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 F10P00742 488 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 ZGLP1P0C6A0 271 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
HDAC5-208ENST00000588419 CCNFP41002 786 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 TSFMP43897 325 aaKnown RBP13.08□□□□□ -0.32
HDAC5-208ENST00000588419 CARSP49589 748 aaKnown RBP13.08□□□□□ -0.32
HDAC5-208ENST00000588419 Q0VFX4 171 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 TLR1Q15399 786 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 VWA2Q5GFL6 755 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 CRB2Q5IJ48 1285 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 ISLR2Q6UXK2 745 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 RNF44Q7L0R7 432 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 ADCK2Q7Z695 626 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 SIRT6Q8N6T7 355 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 CATSPER1Q8NEC5 780 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 MAGEC3Q8TD91 643 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 PEX13Q92968 403 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 ZFYVE21Q9BQ24 234 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 DPH7Q9BTV6 452 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 IL22Q9GZX6 179 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 MRPS30Q9NP92 439 aaKnown RBP13.08□□□□□ -0.32
HDAC5-208ENST00000588419 TREX1Q9NSU2 369 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 IL1RAPL1Q9NZN1 696 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 BFARQ9NZS9 450 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 SPATA7Q9P0W8 599 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 PTGFRNQ9P2B2 879 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 CRYL1Q9Y2S2 319 aa13.08□□□□□ -0.32
HDAC5-208ENST00000588419 TEX15Q9BXT5 2789 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 NSG1A0A0A6YYJ2 146 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 A0A1W2PPV9 198 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 FITM1A5D6W6 292 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 TARM1B6A8C7 271 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 E5RI56 91 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 VPS26AO75436 327 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 KLHL18O94889 574 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 FKBP9O95302 570 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 SYF2O95926 243 aaKnown RBP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 HPP00738 406 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 F7P08709 466 aaPredicted RBP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 CHRM3P20309 590 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 RPS3P23396 243 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 VPS41P49754 854 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 PER3P56645 1201 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 MFAP5Q13361 173 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 RPS6KA1Q15418 735 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 MUM1Q2TAK8 710 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 MRNIPQ6NTE8 343 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 SDCCAG8Q86SQ7 713 aaPredicted RBP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 FJX1Q86VR8 437 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 MPP5Q8N3R9 675 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 PPFIBP2Q8ND30 876 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 OR1N1Q8NGS0 311 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 OR2A1Q8NGT9 310 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 BRIX1Q8TDN6 353 aaKnown RBP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 NACC2Q96BF6 587 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 MMABQ96EY8 250 aaPredicted RBP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 C10orf90Q96M02 699 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 ZNF285Q96NJ3 590 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 TSGA10Q9BZW7 698 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 EIF2B3Q9NR50 452 aaKnown RBP13.07□□□□□ -0.32
HDAC5-208ENST00000588419 OLAHQ9NV23 265 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 PLA2G3Q9NZ20 509 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 TRPC4Q9UBN4 977 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 MYO7BQ6PIF6 2116 aa13.07□□□□□ -0.32
HDAC5-208ENST00000588419 DYTNA2CJ06 578 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 WIPF3A6NGB9 483 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 VSTM2BA6NLU5 285 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 H0YGG7 62 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 PFDN6O15212 129 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 ZG16O60844 167 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 STATHP02808 62 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 HEXBP07686 556 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 CELA2AP08217 269 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 ANXA5P08758 320 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 EDN3P14138 238 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 CXCR2P25025 360 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 KCNJ1P48048 391 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 ARF3P61204 181 aaPredicted RBP13.06□□□□□ -0.32
HDAC5-208ENST00000588419 TRIP13Q15645 432 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms