RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TMEM121Q9BTD3 319 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 CARD6Q9BX69 1037 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 LACRTQ9GZZ8 138 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 INTS7Q9NVH2 962 aaKnown RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 ABI3Q9P2A4 366 aa11.32□□□□□ -0.6
BRCA1-225ENST00000586385 ZNF282Q9UDV7 671 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 ZC3H7BQ9UGR2 993 aaKnown RBP11.32□□□□□ -0.6
BRCA1-225ENST00000586385 CCDC168Q8NDH2 2452 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 NSG1A0A0A6YYJ2 146 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 TRAV17A0A0B4J275 112 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 A0A0U1RQJ8 604 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 GRID2IPA4D2P6 1211 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 IDSB3KWA1 339 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 KDM1AO60341 852 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 UNC5CO95185 931 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 C1orf105O95561 183 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 WDPCPO95876 746 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 SNRPB2P08579 225 aaKnown RBP11.31□□□□□ -0.6
BRCA1-225ENST00000586385 HTR1EP28566 365 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 CA7P43166 264 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 EEF1A2Q05639 463 aaKnown RBP11.31□□□□□ -0.6
BRCA1-225ENST00000586385 FASTKQ14296 549 aaKnown RBP11.31□□□□□ -0.6
BRCA1-225ENST00000586385 INAQ16352 499 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 PRMT9Q6P2P2 845 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 GFRALQ6UXV0 394 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 NDUFAF7Q7L592 441 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 MRGPRGQ86SM5 289 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 OR4L1Q8NH43 312 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 ASZ1Q8WWH4 475 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 P2RY12Q9H244 342 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 SLC39A10Q9ULF5 831 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 RIMKLBQ9ULI2 386 aa11.31□□□□□ -0.6
BRCA1-225ENST00000586385 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 TRGV8A0A0C4DH27 118 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 IGKV1-8A0A0C4DH67 115 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 DYTNA2CJ06 578 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 H0YGG7 62 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 C19orf84I3L1E1 186 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 CCL21O00585 134 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 FOXS1O43638 330 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 SUN1O94901 812 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 FKBP9O95302 570 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 BMP10O95393 424 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 ITGAMP11215 1152 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 FBLP22087 321 aaKnown RBP11.3□□□□□ -0.6
BRCA1-225ENST00000586385 PTGER4P35408 488 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 EMP2P54851 167 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 KRTAP10-9P60411 292 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 ARF3P61204 181 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-225ENST00000586385 PMP22Q01453 160 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 OCA2Q04671 838 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 PCOLCEQ15113 449 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 ZXDCQ2QGD7 858 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-225ENST00000586385 P3H1Q32P28 736 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 FAAH2Q6GMR7 532 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 PRUNE1Q86TP1 453 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 ZNF808Q8N4W9 903 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-225ENST00000586385 IMMP1LQ96LU5 166 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 ALS2CR12Q96Q35 445 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 ETNK1Q9HBU6 452 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 DCHS2Q6V1P9 2916 aa11.3□□□□□ -0.6
BRCA1-225ENST00000586385 SOWAHDA6NJG2 315 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 PRMT5O14744 637 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-225ENST00000586385 PSMD3O43242 534 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 RPN2P04844 631 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 EIF2S1P05198 315 aaKnown RBP11.29□□□□□ -0.6
BRCA1-225ENST00000586385 APOA4P06727 396 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 ERGP11308 486 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 FDXRP22570 491 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 CDH17Q12864 832 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 DSG2Q14126 1118 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 GBX1Q14549 363 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 TESK1Q15569 626 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 SYT16Q17RD7 645 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 MUM1Q2TAK8 710 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 HKDC1Q2TB90 917 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 HIBCHQ6NVY1 386 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-225ENST00000586385 CNSTQ6PJW8 725 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 TMEM205Q6UW68 189 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 TMEM207Q6UWW9 146 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 GDF7Q7Z4P5 450 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 LINC00523Q86TU6 105 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 ZC3H7AQ8IWR0 971 aaKnown RBP11.29□□□□□ -0.6
BRCA1-225ENST00000586385 CCDC170Q8IYT3 715 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 OR6P1Q8NGX9 317 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 ATG4AQ8WYN0 398 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 VPS50Q96JG6 964 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 ZFYVE21Q9BQ24 234 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 DPH7Q9BTV6 452 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 RAB11FIP5Q9BXF6 653 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 RNF32Q9H0A6 362 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 ZNF700Q9H0M5 742 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 TRPC4Q9UBN4 977 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-225ENST00000586385 PACSIN2Q9UNF0 486 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms