RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 PIAS2O75928 621 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PAK4O96013 591 aaPredicted RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 MT-ND5P03915 603 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 HLA-DQB2P05538 268 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 CCDC175P0C221 793 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 HGFP14210 728 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 GNSP15586 552 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PRLRP16471 622 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 TGM2P21980 687 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 EPHA3P29320 983 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 SERPINA4P29622 427 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 HOXD12P35452 270 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 DPP6P42658 865 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 CARSP49589 748 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 CLDN2P57739 230 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 AP1S1P61966 158 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 IFI35P80217 286 aaPredicted RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 HOXA4Q00056 320 aaPredicted RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 OTUD4Q01804 1114 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 BCL2L1Q07817 233 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PPIDQ08752 370 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 NIPAL4Q0D2K0 466 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 CCDC15Q0P6D6 951 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 AP1B1Q10567 949 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 TRAF2Q12933 501 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PDK1Q15118 436 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 UGP2Q16851 508 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 TBC1D25Q3MII6 688 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 RNASE12Q5GAN4 147 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PRAMEF17Q5VTA0 474 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 KDM7AQ6ZMT4 941 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 ZNF66Q6ZN08 573 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PRPF39Q86UA1 669 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 TRIM69Q86WT6 500 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 HORMAD1Q86X24 394 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 SYCE1Q8N0S2 351 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 BBS5Q8N3I7 341 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 RNF10Q8N5U6 811 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 CEP76Q8TAP6 659 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 HCAR2Q8TDS4 363 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PDCD6IPQ8WUM4 868 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 DDB2Q92466 427 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 RMDN1Q96DB5 314 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 ECHDC3Q96DC8 303 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 HES6Q96HZ4 224 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 FEM1CQ96JP0 617 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 SERAC1Q96JX3 654 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 SNX22Q96L94 193 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 ZNF641Q96N77 438 aaPredicted RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 SMIM14Q96QK8 99 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 IL12RB2Q99665 862 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 SEMA3CQ99985 751 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 FAM118BQ9BPY3 351 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 EDEM2Q9BV94 578 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 GTPBP2Q9BX10 602 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 NUSAP1Q9BXS6 441 aaKnown RBP5.06□□□□□ -1.6
CRLF3-206ENST00000585268 OSBPL8Q9BZF1 889 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 TSGA10Q9BZW7 698 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 ATP13A3Q9H7F0 1226 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 IL21RQ9HBE5 538 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PREBQ9HCU5 417 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 SEPT10Q9P0V9 454 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 DKK4Q9UBT3 224 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 ITGB1BP2Q9UKP3 347 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 PPP2R2CQ9Y2T4 447 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 TTLL3Q9Y4R7 772 aa5.06□□□□□ -1.6
CRLF3-206ENST00000585268 MUC3AQ02505 3323 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 ABCA7Q8IZY2 2146 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 CACNA1HO95180 2353 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 GPR179Q6PRD1 2367 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 USP27XA6NNY8 438 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 F5H423 210 aaPredicted RBP5.05□□□□□ -1.6
CRLF3-206ENST00000585268 H7C0C1 242 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 H7C1Q1 480 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 APOC4-APOC2K7ER74 178 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 AGPSO00116 658 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 PMPCBO75439 489 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 NEBLO76041 1014 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 PGLSO95336 258 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 APOC2P02655 101 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 PTMAP06454 111 aaKnown RBP5.05□□□□□ -1.6
CRLF3-206ENST00000585268 MMP2P08253 660 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 CTPS1P17812 591 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 BTF3P20290 206 aaKnown RBP5.05□□□□□ -1.6
CRLF3-206ENST00000585268 PTPN3P26045 913 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 RBL1P28749 1068 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 AKT2P31751 481 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 HSPA9P38646 679 aaKnown RBP5.05□□□□□ -1.6
CRLF3-206ENST00000585268 MMP12P39900 470 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 CD86P42081 329 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 ATP5OP48047 213 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 NR2C2P49116 596 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 TIRAPP58753 221 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 EIF3EP60228 445 aaKnown RBP5.05□□□□□ -1.6
CRLF3-206ENST00000585268 PSG6Q00889 435 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
CRLF3-206ENST00000585268 WASHC5Q12768 1159 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 RALGDSQ12967 914 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 GRIK2Q13002 908 aa5.05□□□□□ -1.6
CRLF3-206ENST00000585268 KIF19Q2TAC6 998 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms