RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ZGLP1P0C6A0 271 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 HSD17B2P37059 387 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 OR1D4P47884 311 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 RELAQ04206 551 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 KLC1Q07866 573 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 CDC16Q13042 620 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 MFAP5Q13361 173 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 ARHGAP19Q14CB8 494 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 RNF187Q5TA31 235 aaPredicted RBP14.33□□□□□ -0.12
VAPA-209ENST00000585042 MRNIPQ6NTE8 343 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 FBXO42Q6P3S6 717 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 RNF44Q7L0R7 432 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 LDB1Q86U70 411 aaPredicted RBP14.33□□□□□ -0.12
VAPA-209ENST00000585042 STT3BQ8TCJ2 826 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 GRHL3Q8TE85 626 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 C1orf54Q8WWF1 131 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 MIEF2Q96C03 454 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 MIPEPQ99797 713 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 ZFYVE21Q9BQ24 234 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 DESI2Q9BSY9 194 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 CRB3Q9BUF7 120 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 SOX17Q9H6I2 414 aaPredicted RBP14.33□□□□□ -0.12
VAPA-209ENST00000585042 UTP6Q9NYH9 597 aaKnown RBP14.33□□□□□ -0.12
VAPA-209ENST00000585042 ZC3H7BQ9UGR2 993 aaKnown RBP14.33□□□□□ -0.12
VAPA-209ENST00000585042 ZKSCAN5Q9Y2L8 839 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 CNTRLQ7Z7A1 2325 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 MDC1Q14676 2089 aaKnown RBP14.33□□□□□ -0.12
VAPA-209ENST00000585042 CREBBPQ92793 2442 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 A0A1W2PPV9 198 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 A0A1W2PQ72 361 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 USP1O94782 785 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 ERGP11308 486 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 ACPPP15309 386 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 CMPK1P30085 196 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 RPL22P35268 128 aaKnown RBP14.32□□□□□ -0.12
VAPA-209ENST00000585042 Q0VFX4 171 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 PDAP1Q13442 181 aaKnown RBP14.32□□□□□ -0.12
VAPA-209ENST00000585042 GBX1Q14549 363 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 PRTGQ2VWP7 1150 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 ANKRD20A4Q4UJ75 823 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 ZNF787Q6DD87 383 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 FRMPD2BQ6IN97 320 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 NDUFAF7Q7L592 441 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 TAX1BP1Q86VP1 789 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 TICAM1Q8IUC6 712 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 LRRC8AQ8IWT6 810 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 KBTBD2Q8IY47 623 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 SKA2Q8WVK7 121 aaPredicted RBP14.32□□□□□ -0.12
VAPA-209ENST00000585042 BIRC8Q96P09 236 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 TRIM56Q9BRZ2 755 aaKnown RBP14.32□□□□□ -0.12
VAPA-209ENST00000585042 KIFC1Q9BW19 673 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 CIDEBQ9UHD4 219 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 CSAG2Q9Y5P2 127 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 NFS1Q9Y697 457 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 CAPN6Q9Y6Q1 641 aa14.32□□□□□ -0.12
VAPA-209ENST00000585042 LOC105369274A0A096LPK9 316 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 LOC102723532A0A0G2JNH3 316 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 A0A0J9YVX5 310 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 A0A1B0GUH1 482 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 ZNF839A8K0R7 811 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 TXNDC9O14530 226 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 MAP2K7O14733 419 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 VPS26AO75436 327 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 ESR1P03372 595 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 STSP08842 583 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 CCDC175P0C221 793 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 ERVK-10P10266 1014 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 PKMP14618 531 aaKnown RBP14.31□□□□□ -0.12
VAPA-209ENST00000585042 ETS1P14921 441 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 COL8A1P27658 744 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 SESN2P58004 480 aaPredicted RBP14.31□□□□□ -0.12
VAPA-209ENST00000585042 AP2B1P63010 937 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 SNX1Q13596 522 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 INAQ16352 499 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 GARNL3Q5VVW2 1013 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 SHISA6Q6ZSJ9 500 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 OR4N4Q8N0Y3 316 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 OR9A1PQ8NGU1 263 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 MAIP1Q8WWC4 291 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 SMPDL3AQ92484 453 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 HAS2Q92819 552 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 TGIF2Q9GZN2 237 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 FAM114A2Q9NRY5 505 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 C3orf18Q9UK00 162 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 MAU2Q9Y6X3 613 aa14.31□□□□□ -0.12
VAPA-209ENST00000585042 A0A0U1RQJ8 604 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 DYTNA2CJ06 578 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 E2F3O00716 465 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 LRRTM2O43300 516 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 ALOX12BO75342 701 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 KLHL18O94889 574 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 VAPBO95292 243 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 ICAM2P13598 275 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 FBLP22087 321 aaKnown RBP14.3□□□□□ -0.12
VAPA-209ENST00000585042 CXCR2P25025 360 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 PSMB5P28074 263 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 NMBRP28336 390 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 EIF3BP55884 814 aaKnown RBP14.3□□□□□ -0.12
VAPA-209ENST00000585042 DSG2Q14126 1118 aa14.3□□□□□ -0.12
VAPA-209ENST00000585042 TYSND1Q2T9J0 566 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms