RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 GABRB3P28472 473 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 RPA3P35244 121 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 CASRP41180 1078 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ELK3P41970 407 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 RGS4P49798 205 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ITGA8P53708 1063 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 EMP3P54852 163 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ARL4CP56559 192 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ABATP80404 500 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 TIAL1Q01085 375 aaKnown RBP eCLIP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 TAP2Q03519 686 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 C1orf189Q5VU69 101 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 CPZQ66K79 652 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ZNF425Q6IV72 752 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 CYHR1Q6ZMK1 362 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 MED25Q71SY5 747 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 PIWIL4Q7Z3Z4 852 aaKnown RBP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 MRGPREQ86SM8 312 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 LRRC56Q8IYG6 542 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 CPNE9Q8IYJ1 553 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 TMEM102Q8N9M5 508 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ZNF480Q8WV37 535 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ZFYVE21Q9BQ24 234 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 PLCD4Q9BRC7 762 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 DPH7Q9BTV6 452 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ING2Q9H160 280 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 WDR54Q9H977 334 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 SLC22A11Q9NSA0 550 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 CUTCQ9NTM9 273 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 IFT80Q9P2H3 777 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 ZC3H7BQ9UGR2 993 aaKnown RBP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 NDOR1Q9UHB4 597 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 GPN3Q9UHW5 284 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-220ENST00000584684 CHMP2BQ9UQN3 213 aa12.6□□□□□ -0.39
ERBB2-220ENST00000584684 PRRC2CQ9Y520 2896 aaKnown RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 IGKV1-8A0A0C4DH67 115 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 ZBTB14O43829 449 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 CNOT3O75175 753 aaKnown RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 DNAJB5O75953 348 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 IGHEP01854 428 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 ALBP02768 609 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 C8GP07360 202 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 PIM1P11309 404 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 EZRP15311 586 aaKnown RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 FOLR3P41439 243 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 RRADP55042 308 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 PRDX1Q06830 199 aaKnown RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 KLRB1Q12918 225 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 SSPNQ14714 243 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 FAM214AQ32MH5 1076 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 TEDDM1Q5T9Z0 273 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 ICE2Q659A1 982 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 PAQR7Q86WK9 346 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 TTC29Q8NA56 475 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 NDNQ99608 321 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 MRPS30Q9NP92 439 aaKnown RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 ZNF71Q9NQZ8 489 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 ACSS2Q9NR19 701 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 UTP6Q9NYH9 597 aaKnown RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 TAC3Q9UHF0 121 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 NXT1Q9UKK6 140 aaKnown RBP12.59□□□□□ -0.39
ERBB2-220ENST00000584684 PCDHGB7Q9Y5F8 929 aa12.59□□□□□ -0.39
ERBB2-220ENST00000584684 ARGFXA6NJG6 315 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 EFCAB8A8MWE9 144 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 SLC16A5O15375 505 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 NRP2O60462 931 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 TSPAN12O95859 305 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 AHSGP02765 367 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 MCM3P25205 808 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 IMPA1P29218 277 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 CSRP3P50461 194 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 PGDP52209 483 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 CDKN2DP55273 166 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 VSX2P58304 361 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 ILF2Q12905 390 aaKnown RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 PTPN13Q12923 2485 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 ATP1A4Q13733 1029 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 PRTGQ2VWP7 1150 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 WASHC2DQ5SRD0 308 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 RBM20Q5T481 1227 aaKnown RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 FRMPD2BQ6IN97 320 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 PRMT9Q6P2P2 845 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 TRMT10BQ6PF06 316 aaKnown RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 SUSD1Q6UWL2 747 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 TTLL10Q6ZVT0 673 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 ASB18Q6ZVZ8 466 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 UBE2R2Q712K3 238 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 COX15Q7KZN9 410 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 OVCH1Q7RTY7 1134 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 PTRH1Q86Y79 214 aaKnown RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 HPS6Q86YV9 775 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 BBOF1Q8ND07 529 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 PTERQ96BW5 349 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 KRT12Q99456 494 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 ACAT2Q9BWD1 397 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 EPN3Q9H201 632 aa12.58□□□□□ -0.4
ERBB2-220ENST00000584684 PTRH2Q9Y3E5 179 aaKnown RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms