RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 P2RY12Q9H244 342 aa15.06■□□□□ 0
SKA2-209ENST00000583976 VPS37BQ9H9H4 285 aa15.06■□□□□ 0
SKA2-209ENST00000583976 ZBTB20Q9HC78 741 aaPredicted RBP15.06■□□□□ 0
SKA2-209ENST00000583976 ASF1BQ9NVP2 202 aa15.06■□□□□ 0
SKA2-209ENST00000583976 CIDEBQ9UHD4 219 aa15.06■□□□□ 0
SKA2-209ENST00000583976 SERTAD3Q9UJW9 196 aa15.06■□□□□ 0
SKA2-209ENST00000583976 NFU1Q9UMS0 254 aa15.06■□□□□ 0
SKA2-209ENST00000583976 G3BP2Q9UN86 482 aaKnown RBP15.06■□□□□ 0
SKA2-209ENST00000583976 ASF1AQ9Y294 204 aa15.06■□□□□ 0
SKA2-209ENST00000583976 KLHL20Q9Y2M5 609 aa15.06■□□□□ 0
SKA2-209ENST00000583976 TDRKHQ9Y2W6 561 aaKnown RBP15.06■□□□□ 0
SKA2-209ENST00000583976 CSAG2Q9Y5P2 127 aa15.06■□□□□ 0
SKA2-209ENST00000583976 CENPEQ02224 2701 aa15.06■□□□□ 0
SKA2-209ENST00000583976 QSOX1O00391 747 aa15.05■□□□□ -0
SKA2-209ENST00000583976 ZSCAN9O15535 394 aaPredicted RBP15.05■□□□□ -0
SKA2-209ENST00000583976 HAUS5O94927 633 aa15.05■□□□□ -0
SKA2-209ENST00000583976 SLU7O95391 586 aaKnown RBP15.05■□□□□ -0
SKA2-209ENST00000583976 S1PR4O95977 384 aa15.05■□□□□ -0
SKA2-209ENST00000583976 FTH1P02794 183 aa15.05■□□□□ -0
SKA2-209ENST00000583976 UMODP07911 640 aa15.05■□□□□ -0
SKA2-209ENST00000583976 AGXTP21549 392 aa15.05■□□□□ -0
SKA2-209ENST00000583976 ACADLP28330 430 aa15.05■□□□□ -0
SKA2-209ENST00000583976 SHMT2P34897 504 aa15.05■□□□□ -0
SKA2-209ENST00000583976 RRADP55042 308 aa15.05■□□□□ -0
SKA2-209ENST00000583976 CSE1LP55060 971 aaKnown RBP15.05■□□□□ -0
SKA2-209ENST00000583976 RPA4Q13156 261 aa15.05■□□□□ -0
SKA2-209ENST00000583976 CBLBQ13191 982 aa15.05■□□□□ -0
SKA2-209ENST00000583976 PLEKHN1Q494U1 663 aaPredicted RBP15.05■□□□□ -0
SKA2-209ENST00000583976 RNF187Q5TA31 235 aaPredicted RBP15.05■□□□□ -0
SKA2-209ENST00000583976 C3orf62Q6ZUJ4 267 aa15.05■□□□□ -0
SKA2-209ENST00000583976 PPP1R32Q7Z5V6 425 aa15.05■□□□□ -0
SKA2-209ENST00000583976 GPR135Q8IZ08 494 aa15.05■□□□□ -0
SKA2-209ENST00000583976 LKAAEAR1Q8TD35 194 aa15.05■□□□□ -0
SKA2-209ENST00000583976 ELMO1Q92556 727 aa15.05■□□□□ -0
SKA2-209ENST00000583976 LPGAT1Q92604 370 aa15.05■□□□□ -0
SKA2-209ENST00000583976 N4BP2L2Q92802 583 aaPredicted RBP15.05■□□□□ -0
SKA2-209ENST00000583976 FAM136AQ96C01 138 aa15.05■□□□□ -0
SKA2-209ENST00000583976 FMO2Q99518 471 aa15.05■□□□□ -0
SKA2-209ENST00000583976 SLC29A3Q9BZD2 475 aa15.05■□□□□ -0
SKA2-209ENST00000583976 IRAK4Q9NWZ3 460 aa15.05■□□□□ -0
SKA2-209ENST00000583976 GNPTGQ9UJJ9 305 aa15.05■□□□□ -0
SKA2-209ENST00000583976 FBXO5Q9UKT4 447 aa15.05■□□□□ -0
SKA2-209ENST00000583976 NTNG1Q9Y2I2 539 aa15.05■□□□□ -0
SKA2-209ENST00000583976 CSMD1Q96PZ7 3565 aa15.04■□□□□ -0
SKA2-209ENST00000583976 CELSR2Q9HCU4 2923 aa15.04■□□□□ -0
SKA2-209ENST00000583976 A0A0J9YY10 115 aa15.04■□□□□ -0
SKA2-209ENST00000583976 PIAS1O75925 651 aa15.04■□□□□ -0
SKA2-209ENST00000583976 CLDN1O95832 211 aa15.04■□□□□ -0
SKA2-209ENST00000583976 ITGAXP20702 1163 aa15.04■□□□□ -0
SKA2-209ENST00000583976 ECHS1P30084 290 aa15.04■□□□□ -0
SKA2-209ENST00000583976 FOLR3P41439 243 aa15.04■□□□□ -0
SKA2-209ENST00000583976 GPX6P59796 221 aa15.04■□□□□ -0
SKA2-209ENST00000583976 MGAT5Q09328 741 aa15.04■□□□□ -0
SKA2-209ENST00000583976 CUL1Q13616 776 aa15.04■□□□□ -0
SKA2-209ENST00000583976 SYTL3Q4VX76 610 aa15.04■□□□□ -0
SKA2-209ENST00000583976 CTSL3PQ5NE16 218 aa15.04■□□□□ -0
SKA2-209ENST00000583976 DCAF10Q5QP82 559 aa15.04■□□□□ -0
SKA2-209ENST00000583976 TEDDM1Q5T9Z0 273 aa15.04■□□□□ -0
SKA2-209ENST00000583976 RHBDD2Q6NTF9 364 aa15.04■□□□□ -0
SKA2-209ENST00000583976 CNSTQ6PJW8 725 aa15.04■□□□□ -0
SKA2-209ENST00000583976 TAX1BP1Q86VP1 789 aa15.04■□□□□ -0
SKA2-209ENST00000583976 LMNTD2Q8IXW0 634 aa15.04■□□□□ -0
SKA2-209ENST00000583976 CISD2Q8N5K1 135 aaKnown RBP15.04■□□□□ -0
SKA2-209ENST00000583976 C2CD4AQ8NCU7 369 aaPredicted RBP15.04■□□□□ -0
SKA2-209ENST00000583976 GABPB2Q8TAK5 448 aaPredicted RBP15.04■□□□□ -0
SKA2-209ENST00000583976 BIRC8Q96P09 236 aa15.04■□□□□ -0
SKA2-209ENST00000583976 DPH2Q9BQC3 489 aaPredicted RBP15.04■□□□□ -0
SKA2-209ENST00000583976 DHRS4Q9BTZ2 278 aa15.04■□□□□ -0
SKA2-209ENST00000583976 SLC22A11Q9NSA0 550 aa15.04■□□□□ -0
SKA2-209ENST00000583976 INTS10Q9NVR2 710 aaKnown RBP15.04■□□□□ -0
SKA2-209ENST00000583976 CUEDC1Q9NWM3 386 aaPredicted RBP15.04■□□□□ -0
SKA2-209ENST00000583976 P4HTMQ9NXG6 502 aa15.04■□□□□ -0
SKA2-209ENST00000583976 IFT80Q9P2H3 777 aaPredicted RBP15.04■□□□□ -0
SKA2-209ENST00000583976 CROCCQ5TZA2 2017 aa15.04■□□□□ -0
SKA2-209ENST00000583976 F8W8V4 182 aa15.03■□□□□ -0
SKA2-209ENST00000583976 MAP3K7O43318 606 aa15.03■□□□□ -0
SKA2-209ENST00000583976 NIPSNAP2O75323 286 aa15.03■□□□□ -0
SKA2-209ENST00000583976 CHRM3P20309 590 aa15.03■□□□□ -0
SKA2-209ENST00000583976 RPS3P23396 243 aaKnown RBP eCLIP15.03■□□□□ -0
SKA2-209ENST00000583976 CCR7P32248 378 aa15.03■□□□□ -0
SKA2-209ENST00000583976 MYBPC3Q14896 1274 aa15.03■□□□□ -0
SKA2-209ENST00000583976 LRRC6Q86X45 466 aa15.03■□□□□ -0
SKA2-209ENST00000583976 IQCKQ8N0W5 287 aa15.03■□□□□ -0
SKA2-209ENST00000583976 GALNT16Q8N428 558 aa15.03■□□□□ -0
SKA2-209ENST00000583976 DTWD1Q8N5C7 304 aa15.03■□□□□ -0
SKA2-209ENST00000583976 OR2Y1Q8NGV0 311 aa15.03■□□□□ -0
SKA2-209ENST00000583976 PROKR1Q8TCW9 393 aa15.03■□□□□ -0
SKA2-209ENST00000583976 TSSK1BQ9BXA7 367 aa15.03■□□□□ -0
SKA2-209ENST00000583976 FAM129AQ9BZQ8 928 aa15.03■□□□□ -0
SKA2-209ENST00000583976 PHACTR1Q9C0D0 580 aa15.03■□□□□ -0
SKA2-209ENST00000583976 ZNF552Q9H707 407 aaPredicted RBP15.03■□□□□ -0
SKA2-209ENST00000583976 MOCS1Q9NZB8 636 aa15.03■□□□□ -0
SKA2-209ENST00000583976 ZFATQ9P243 1243 aa15.03■□□□□ -0
SKA2-209ENST00000583976 NDOR1Q9UHB4 597 aa15.03■□□□□ -0
SKA2-209ENST00000583976 GPN3Q9UHW5 284 aaPredicted RBP15.03■□□□□ -0
SKA2-209ENST00000583976 B3GNT3Q9Y2A9 372 aa15.03■□□□□ -0
SKA2-209ENST00000583976 VPS9D1Q9Y2B5 631 aa15.03■□□□□ -0
SKA2-209ENST00000583976 SLC5A10A0PJK1 596 aa15.02■□□□□ -0
SKA2-209ENST00000583976 LIN7AO14910 233 aaPredicted RBP15.02■□□□□ -0
SKA2-209ENST00000583976 LDLRP01130 860 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms