RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 WHAMMP3Q1A5X7 153 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MUM1Q2TAK8 710 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PRMT9Q6P2P2 845 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 RNF44Q7L0R7 432 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SDCCAG8Q86SQ7 713 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CUZD1Q86UP6 607 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MNS1Q8NEH6 495 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OR2L3Q8NG85 312 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 HMGCLL1Q8TB92 370 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 INPP5DQ92835 1189 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZUFSPQ96AP4 578 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MIEF2Q96C03 454 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 THOC3Q96J01 351 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CABS1Q96KC9 395 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZFYVE21Q9BQ24 234 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 LHPPQ9H008 270 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZBTB20Q9HC78 741 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZNF304Q9HCX3 659 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FAM114A2Q9NRY5 505 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SLC22A11Q9NSA0 550 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TREX1Q9NSU2 369 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SYBUQ9NX95 663 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZNF282Q9UDV7 671 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZC3H7BQ9UGR2 993 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ERRFI1Q9UJM3 462 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 DRG1Q9Y295 367 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MAU2Q9Y6X3 613 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PTPN13Q12923 2485 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 HYKKA2RU49 373 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FITM1A5D6W6 292 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 KRT87PA6NCN2 255 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZNF839A8K0R7 811 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CCDC188H7C350 402 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FANCGO15287 622 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CTSVO60911 334 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PHF2O75151 1096 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NIPSNAP2O75323 286 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CCNDBP1O95273 360 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CBX6O95503 412 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ESR1P03372 595 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CATP04040 527 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TPSB2P20231 275 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OGNP20774 298 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MGAT1P26572 445 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ATP5DP30049 168 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 RPA3P35244 121 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TSFMP43897 325 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NPY2RP49146 381 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PER3P56645 1201 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SARNPP82979 210 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TPSAB1Q15661 275 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 HIF1AQ16665 826 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TYSND1Q2T9J0 566 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TTLL9Q3SXZ7 439 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CCSMST1Q4G0I0 132 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CTSL3PQ5NE16 218 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 WASHC2DQ5SRD0 308 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 B3GNTL1Q67FW5 361 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FRMPD2BQ6IN97 320 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CASC4Q6P4E1 433 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FAM180AQ6UWF9 173 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TMEM151BQ8IW70 566 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CEP112Q8N8E3 955 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ST6GALNAC3Q8NDV1 305 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OR2A1Q8NGT9 310 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FAM136AQ96C01 138 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MFSD3Q96ES6 412 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZNF285Q96NJ3 590 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ACAT2Q9BWD1 397 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZNF160Q9HCG1 818 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 UTP6Q9NYH9 597 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SAMD15Q9P1V8 674 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CDC14AQ9UNH5 594 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 VPS9D1Q9Y2B5 631 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CSAG2Q9Y5P2 127 aa8.32□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MED13Q9UHV7 2174 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CCDC88CQ9P219 2028 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NSG1A0A0A6YYJ2 146 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 DYTNA2CJ06 578 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OR2A25A4D2G3 310 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CTAGE15A4D2H0 777 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 GOLGA8KD6RF30 607 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 GOLGA8TH3BQL2 631 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PRICKLE3O43900 615 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NRP2O60462 931 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 VAPBO95292 243 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ONECUT2O95948 504 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 HPP00738 406 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 LDLRP01130 860 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZGLP1P0C6A0 271 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CTAGE8P0CG41 777 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 EDN3P14138 238 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CHRM3P20309 590 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FDXRP22570 491 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CXCR2P25025 360 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FMO4P31512 558 aa8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 COILP38432 576 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-229ENST00000583697 KCNJ1P48048 391 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms