RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PROX2Q3B8N5 592 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ARL13AQ5H913 290 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SNX31Q8N9S9 440 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TRPC4APQ8TEL6 797 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GATA6Q92908 595 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TRMOQ9BU70 441 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NOL11Q9H8H0 719 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 IPPKQ9H8X2 491 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SEMA4BQ9NPR2 832 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SPHK1Q9NYA1 384 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ADAM21Q9UKJ8 722 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 BTBD3Q9Y2F9 522 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ANGPTL3Q9Y5C1 460 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PCDHB11Q9Y5F2 797 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GOLGA4Q13439 2230 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZFYVE26Q68DK2 2539 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 EME2A4GXA9 379 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR6C74A6NCV1 312 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TCP11X1B4DZS4 312 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR7A17O14581 309 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 B4GAT1O43505 415 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LYPLA1O75608 230 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 UBXN7O94888 489 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 MLYCDO95822 493 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CD59P13987 128 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 HOXB3P14651 431 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 POLR2CP19387 275 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PEBP1P30086 187 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GRK6P43250 576 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 EPHA4P54764 986 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PCDH1Q08174 1060 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CDC16Q13042 620 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TSTA3Q13630 321 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 INAVAQ3KP66 663 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TUBB8Q3ZCM7 444 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PRAMEF13Q5VWM6 474 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR2A1Q8NGT9 310 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SORT1Q99523 831 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 HAUS8Q9BT25 410 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NTMT1Q9BV86 223 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ABCF3Q9NUQ8 709 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 HRASLS2Q9NWW9 162 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GPRC5BQ9NZH0 403 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ENTPD2Q9Y5L3 495 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 KCNE2Q9Y6J6 123 aa15.78■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ATRXP46100 2492 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PIPSLA2A3N6 862 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR5K3A6NET4 321 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 UBFD1O14562 309 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 FLRT2O43155 660 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 KATNA1O75449 491 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SNUPNO95149 360 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CHRNGP07510 517 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CKMT1AP12532 417 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TYRP1P17643 537 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 AMD1P17707 334 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 DUSP3P51452 185 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR1D5P58170 312 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GNGT1P63211 74 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SH3BP2P78314 561 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OCRLQ01968 901 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PRDX1Q06830 199 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LCP2Q13094 533 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 KIR2DS3Q14952 304 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 THEMIS2Q5TEJ8 643 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OOSP2Q86WS3 158 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 FLVCR1-AS1Q8TAF5 88 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RHBDD1Q8TEB9 315 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SLC22A18Q96BI1 424 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR2A14Q96R47 310 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZNF382Q96SR6 550 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 EML4Q9HC35 981 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 KCNK4Q9NYG8 393 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ACTR10Q9NZ32 417 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TAC3Q9UHF0 121 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 DYRK1BQ9Y463 629 aa15.77■□□□□ 0.12
CDK5RAP3-228ENST00000583363 A0A1B0GTL3 188 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 CPED1A4D0V7 1026 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 TMEM8BA6NDV4 472 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 ISM1B1AKI9 464 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 CLGNO14967 610 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 PRAMEF4O60810 478 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 LDOC1O95751 146 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 HSPA4LO95757 839 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 GNAZP19086 355 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 PSMB5P28074 263 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 ALDH4A1P30038 563 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 PRDX3P30048 256 aaKnown RBP15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 LSP1P33241 339 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 CASP2P42575 452 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 CCNG1P51959 295 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 PKNOX1P55347 436 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 ERVPABLB-1P60509 514 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 RBBP7Q16576 425 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 PRAMEF9Q5VWM5 478 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 GUSBP11Q6P575 273 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 KLHL35Q6PF15 583 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 MILR1Q7Z6M3 343 aa15.76■□□□□ 0.11
CDK5RAP3-228ENST00000583363 CUZD1Q86UP6 607 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms