RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 HLA-FP30511 346 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 MATR3P43243 847 aaKnown RBP eCLIP3.3□□□□□ -1.88
COPS3-217ENST00000583160 TSFMP43897 325 aaKnown RBP3.3□□□□□ -1.88
COPS3-217ENST00000583160 LBX1P52954 281 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 GUCY2DQ02846 1103 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 MTF1Q14872 753 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 PCLAFQ15004 111 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 EFTUD2Q15029 972 aaKnown RBP eCLIP3.3□□□□□ -1.887e-10■■■■■ 51.8
COPS3-217ENST00000583160 ZNF74Q16587 644 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 C15orf59Q2T9L4 293 aaPredicted RBP3.3□□□□□ -1.88
COPS3-217ENST00000583160 KIF6Q6ZMV9 814 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 C4orf50Q6ZRC1 276 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 ARHGAP22Q7Z5H3 698 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 RPAP2Q8IXW5 612 aaPredicted RBP3.3□□□□□ -1.88
COPS3-217ENST00000583160 FBXL16Q8N461 479 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 TEX19Q8NA77 164 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 THAP8Q8NA92 274 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 AQP11Q8NBQ7 271 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 MIPOL1Q8TD10 442 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 SLAMF9Q96A28 289 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 SPDL1Q96EA4 605 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 FAM20AQ96MK3 541 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 SFXN2Q96NB2 322 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 GAL3ST4Q96RP7 486 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 GHITMQ9H3K2 345 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 SLC35C2Q9NQQ7 365 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 HAUS2Q9NVX0 235 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 MAN1B1Q9UKM7 699 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 PADI2Q9Y2J8 665 aa3.3□□□□□ -1.88
COPS3-217ENST00000583160 RAPGEF2Q9Y4G8 1499 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 UACAQ9BZF9 1416 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 ASB14A6NK59 587 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 IPO8O15397 1037 aaKnown RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 TOMM70O94826 608 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 SAT1P21673 171 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 HOXD13P35453 343 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 RXRGP48443 463 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 STAT2P52630 851 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 SLC25A30Q5SVS4 291 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 CATSPERDQ86XM0 798 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 ZNF595Q8IYB9 648 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 ATP8B4Q8TF62 1192 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 SYN2Q92777 582 aaPredicted RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 SPACA9Q96E40 222 aaPredicted RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 THOC1Q96FV9 657 aaKnown RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 SLC45A3Q96JT2 553 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 TREX2Q9BQ50 279 aaPredicted RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 TEX12Q9BXU0 123 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 STK26Q9P289 416 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 C19orf25Q9UFG5 118 aaPredicted RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 FBXO2Q9UK22 296 aaPredicted RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 RARRES3Q9UL19 164 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 TMED3Q9Y3Q3 217 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 EPRSP07814 1512 aaKnown RBP3.29□□□□□ -1.88
COPS3-217ENST00000583160 MAGI3Q5TCQ9 1506 aa3.29□□□□□ -1.88
COPS3-217ENST00000583160 PRXQ9BXM0 1461 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 CFAP43Q8NDM7 1665 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 CTTNBP2Q8WZ74 1663 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 PI4K2BG5E9Z4 385 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 GJB3O75712 270 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 IGHV2-70P01814 119 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 DANCRP0C864 163 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 HAPLN1P10915 354 aaPredicted RBP3.28□□□□□ -1.88
COPS3-217ENST00000583160 XGP55808 180 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 CES4AQ5XG92 561 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 FRRS1Q6ZNA5 592 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 LGI2Q8N0V4 545 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 SLC39A11Q8N1S5 342 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 C17orf47Q8NEP4 570 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 LRRC15Q8TF66 581 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 PIGBQ92521 554 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 SKA1Q96BD8 255 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 SPAG5Q96R06 1193 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 B3GAT2Q9NPZ5 323 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 NDE1Q9NXR1 346 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 KIAA0556O60303 1618 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 ABCA8O94911 1581 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 GON4LQ3T8J9 2241 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 PRRC2AP48634 2157 aaKnown RBP3.28□□□□□ -1.88
COPS3-217ENST00000583160 TEX14Q8IWB6 1497 aa3.28□□□□□ -1.88
COPS3-217ENST00000583160 ZCCHC11Q5TAX3 1644 aaKnown RBP3.27□□□□□ -1.89
COPS3-217ENST00000583160 TSPOAP1O95153 1857 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 LOC105371242A0A075B767 164 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 FSD2A1L4K1 749 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 NEMP2A6NFY4 417 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 SNURFLB1AK76 121 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 TSPAN9O75954 239 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 CSH1P0DML2 217 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 CSH2P0DML3 217 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 PRKAR1AP10644 381 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 LIMK2P53671 638 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 PSMC6P62333 389 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 CHAF1BQ13112 559 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 Q6ZR54 194 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 NUP54Q7Z3B4 507 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 MMD2Q8IY49 270 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 POM121L12Q8N7R1 296 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 APPL2Q8NEU8 664 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 OR10S1Q8NGN2 331 aa3.27□□□□□ -1.89
COPS3-217ENST00000583160 C11orf45Q8TAV5 145 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms