RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ERVK-6Q9BXR3 956 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ARRDC1-AS1Q9H2J1 176 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 KIR3DX1Q9H7L2 352 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 UCK1Q9HA47 277 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 SLC40A1Q9NP59 571 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 POT1Q9NUX5 634 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 ARL15Q9NXU5 204 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 CPNE7Q9UBL6 633 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 LNPEPQ9UIQ6 1025 aa7.77□□□□□ -1.17
COPS3-215ENST00000578317 PLXNB3Q9ULL4 1909 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 MUC6Q6W4X9 2439 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PABPN1LA6NDY0 278 aaKnown RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 OR52A4PA6NMU1 304 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 ZNF839A8K0R7 811 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PATE3B3GLJ2 98 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 LINC01387J3KSC0 135 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 TAPBPO15533 448 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 LRP3O75074 770 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 H2AFYO75367 372 aaKnown RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 CER1O95813 267 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 SLC16A8O95907 504 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 GFAPP14136 432 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 EPHA8P29322 1005 aaPredicted RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 GALNT1Q10472 559 aaPredicted RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 BNIP3Q12983 259 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 SETDB1Q15047 1291 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PDK4Q16654 411 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PFKFB4Q16877 469 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 ZXDCQ2QGD7 858 aaPredicted RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 ZNF678Q5SXM1 525 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 SLC9B2Q86UD5 537 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 RAB42Q8N4Z0 105 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PTGR2Q8N8N7 351 aaPredicted RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 FAM181AQ8N9Y4 354 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 GPR156Q8NFN8 814 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 OR5AR1Q8NGP9 310 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 MGARPQ8TDB4 240 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 UBTD2Q8WUN7 234 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 ZNF75CPQ92670 426 aaPredicted RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 PLPPR2Q96GM1 343 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 MAGEB18Q96M61 343 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 CAMK1GQ96NX5 476 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PKP4Q99569 1192 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PAIP2Q9BPZ3 127 aaKnown RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 TRMOQ9BU70 441 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 GATA5Q9BWX5 397 aaPredicted RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 RAB11FIP5Q9BXF6 653 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 CD244Q9BZW8 370 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 NRSN2Q9GZP1 204 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 GAREM1Q9H706 876 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 IMP3Q9NV31 184 aaKnown RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 UCKL1Q9NWZ5 548 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 UTP6Q9NYH9 597 aaKnown RBP7.76□□□□□ -1.17
COPS3-215ENST00000578317 NCKIPSDQ9NZQ3 722 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 CD274Q9NZQ7 290 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 SPATA7Q9P0W8 599 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 PCDHGB2Q9Y5G2 931 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 CACNA1EQ15878 2313 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 DOCK9Q9BZ29 2069 aa7.76□□□□□ -1.17
COPS3-215ENST00000578317 SUPT3HB4E1H0 165 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 E7ENX8 843 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 M0R082 166 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 NOBOXO60393 691 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 NPHS1O60500 1241 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 FOXD2O60548 495 aaPredicted RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 SUPT3HO75486 399 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 STK16O75716 305 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 GUCA1CO95843 209 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 VIPP01282 170 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 S100BP04271 92 aaPredicted RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 SERPINE1P05121 402 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 FGF3P11487 239 aaPredicted RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 ENGP17813 658 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 CCND1P24385 295 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 IMPA1P29218 277 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 SLC6A12P48065 614 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 CCT8P50990 548 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 RAB28P51157 221 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 NAGLUP54802 743 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 TAP2Q03519 686 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 PRKG2Q13237 762 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 SLC14A1Q13336 389 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 KRT33BQ14525 404 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 LPAL2Q16609 132 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 CCSMST1Q4G0I0 132 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 ATG16L1Q676U5 607 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 ANKS6Q68DC2 871 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 AGTRAPQ6RW13 159 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 LRRC56Q8IYG6 542 aaPredicted RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 ARL14Q8N4G2 192 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 SVOPQ8N4V2 548 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 OR56A3Q8NH54 315 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 ZNF417Q8TAU3 575 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 MAPK15Q8TD08 544 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 SLC37A2Q8TED4 501 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 SETD7Q8WTS6 366 aaKnown RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 ZNF480Q8WV37 535 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 SH3KBP1Q96B97 665 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 CXorf40BQ96DE9 158 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms