RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SHISA3A0PJX4 238 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 H3BNC9 293 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 B4GAT1O43505 415 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 RGS9O75916 674 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 KCNH1O95259 989 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ASGR2P07307 311 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ENO2P09104 434 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 CDK4P11802 303 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 DRD2P14416 443 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MTHFRP42898 656 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 CDK9P50750 372 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 ADARP55265 1226 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 HSPA14Q0VDF9 509 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SMARCB1Q12824 385 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 BFSP2Q13515 415 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ATP6AP1Q15904 470 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PHKG1Q16816 387 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SPANXN4Q5MJ08 99 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 INTS11Q5TA45 600 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 CACHD1Q5VU97 1274 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TXNDC8Q6A555 127 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 NCEH1Q6PIU2 408 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SPESP1Q6UW49 350 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 DET1Q7L5Y6 550 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ANKRD46Q86W74 232 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ZFAND4Q86XD8 727 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ZDHHC13Q8IUH4 622 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 RBFAQ8N0V3 343 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 LRRC43Q8N309 656 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 DTWD1Q8N5C7 304 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PACRGLQ8N7B6 248 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 LKAAEAR1Q8TD35 194 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PAWRQ96IZ0 340 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 PPP3R2Q96LZ3 170 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TSSK3Q96PN8 268 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 GALNT8Q9NY28 637 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ADGRE2Q9UHX3 823 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ZNF490Q9ULM2 529 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 PHF24Q9UPV7 400 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 LOC730098B7Z3J9 87 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 INPPL1O15357 1258 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SMAD6O43541 496 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 RGS14O43566 566 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 NOBOXO60393 691 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SH3BGRLO75368 114 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 LRATO95237 230 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 RASAL1O95294 804 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ZDHHC11BP0C7U3 371 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 DGKAP23743 735 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MAP4P27816 1152 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 ELK4P28324 431 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 CST5P28325 142 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 TSTA3Q13630 321 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 DDX39BQ13838 428 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 CHRNA6Q15825 494 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 CRY1Q16526 586 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PGS1Q32NB8 556 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 GTDC1Q4AE62 458 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 XKR7Q5GH72 579 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 RETSATQ6NUM9 610 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TBPL2Q6SJ96 375 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TMEM26Q6ZUK4 368 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 KCTD8Q6ZWB6 473 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PROSER1Q86XN7 944 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 C7orf61Q8IZ16 206 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PHACTR4Q8IZ21 702 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 LIX1Q8N485 282 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 KRTCAP2Q8N6L1 136 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MFSD2AQ8NA29 543 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TSPEARQ8WU66 669 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SLC13A3Q8WWT9 602 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TMBIM1Q969X1 311 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 C12orf43Q96C57 262 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 DUS3LQ96G46 650 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 AURKBQ96GD4 344 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 TMEM169Q96HH4 297 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 SLC22A12Q96S37 553 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 FEM1AQ9BSK4 669 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MRPL9Q9BYD2 267 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 SMURF2Q9HAU4 748 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PARVBQ9HBI1 364 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 RASSF1Q9NS23 344 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 ARL15Q9NXU5 204 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MAGEL2Q9UJ55 1249 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 GNPTGQ9UJJ9 305 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 FBXL7Q9UJT9 491 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 TMCO1Q9UM00 188 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 INVSQ9Y283 1065 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 YIPF1Q9Y548 306 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PCDHB1Q9Y5F3 818 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 CPQQ9Y646 472 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 MYO7AQ13402 2215 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 NUP214P35658 2090 aaPredicted RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 GLYATL1P3A0A0U1RQE8 302 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 PTGES3LE9PB15 166 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 DVL2O14641 736 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 RSL1D1O76021 490 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 INMTO95050 263 aa5.22□□□□□ -1.57
VAPA-203ENST00000577539 CNOT4O95628 575 aaKnown RBP5.22□□□□□ -1.57
VAPA-203ENST00000577539 CST1P01037 141 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms