RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PYGMP11217 842 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 ST6GAL1P15907 406 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 CDH3P22223 829 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 PTPN4P29074 926 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 PDHA2P29803 388 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 UQCRFS1P47985 274 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 CCL11P51671 97 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 ZNF140P52738 457 aaPredicted RBP6.03□□□□□ -1.44
NUP88-212ENST00000576708 PMS2P54278 862 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 GYS2P54840 703 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 GPR85P60893 370 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 GUCY1A3Q02108 690 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 ACY1Q03154 408 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 PRKG2Q13237 762 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 SEMA5AQ13591 1074 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 LAMB3Q13751 1172 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 KRT33BQ14525 404 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 UGT8Q16880 541 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 NADK2Q4G0N4 442 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 BCL7AQ4VC05 210 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 PLEKHS1Q5SXH7 462 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 HIST2H2BCQ6DN03 193 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 ITPRIPL1Q6GPH6 555 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 C11orf63Q6NUN7 778 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 TCTN3Q6NUS6 607 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 ARMC6Q6NXE6 501 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 KLHL35Q6PF15 583 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 CLEC18BQ6UXF7 455 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 RPTNQ6XPR3 784 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 NAPRTQ6XQN6 538 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 OOSP2Q86WS3 158 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 TMEM126BQ8IUX1 230 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 CDKL3Q8IVW4 592 aaPredicted RBP6.03□□□□□ -1.44
NUP88-212ENST00000576708 TMEM151BQ8IW70 566 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 NXPE1Q8N323 547 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 CLDN19Q8N6F1 224 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 TEX19Q8NA77 164 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 CLEC18CQ8NCF0 446 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 OR1L3Q8NH93 324 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 ALG3Q92685 438 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 MIB2Q96AX9 1013 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 DCUN1D1Q96GG9 259 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 DNAJC1Q96KC8 554 aaKnown RBP6.03□□□□□ -1.44
NUP88-212ENST00000576708 CD180Q99467 661 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 TBL1YQ9BQ87 522 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 OSBPL8Q9BZF1 889 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 TRIM5Q9C035 493 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 KIR3DX1Q9H7L2 352 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 KCND1Q9NSA2 647 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 SOHLH2Q9NX45 425 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 LUZP4Q9P127 313 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 KLHL14Q9P2G3 628 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 KCND3Q9UK17 655 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 ACSL5Q9ULC5 683 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 FARSAQ9Y285 508 aaKnown RBP6.03□□□□□ -1.44
NUP88-212ENST00000576708 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
NUP88-212ENST00000576708 REXO2Q9Y3B8 237 aaKnown RBP6.03□□□□□ -1.44
NUP88-212ENST00000576708 PCDHGA6Q9Y5G7 932 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 PCDHA3Q9Y5H8 950 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 PRSS21Q9Y6M0 314 aa6.03□□□□□ -1.44
NUP88-212ENST00000576708 PCSK5Q92824 1860 aa6.02□□□□□ -1.44
NUP88-212ENST00000576708 TCRBV7S2A1N4TA0A589 114 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 C5orf60A6NFR6 353 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 OR51F1A6NGY5 319 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 A6NL46 340 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 AGAP14A8MT82 685 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 C21orf140B9A014 251 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 HCRTR1O43613 425 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 LDB2O43679 373 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 METTL18O95568 372 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ZBTB11O95625 1053 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 CAPN1P07384 714 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ATP1B2P14415 290 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 GNLYP22749 145 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 CTNNA2P26232 953 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 PRDX3P30048 256 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 MC4RP32245 332 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 CTNNA1P35221 906 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 LMAN1P49257 510 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 PRLHRP49683 370 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 NAP1L1P55209 391 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 FOXL2P58012 376 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 RPS15P62841 145 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 TUBB4BP68371 445 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 TUBB2AQ13885 445 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 PRPSAP1Q14558 356 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 POU6F1Q14863 301 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 BRD3Q15059 726 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 SPA17Q15506 151 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 SKOR2Q2VWA4 1001 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 PTCHD3Q3KNS1 767 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ZNF658BQ4V348 819 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 C4orf46Q504U0 113 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 PRR30Q53SZ7 412 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 ZRANB3Q5FWF4 1079 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ZNF789Q5FWF6 425 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 RAD9BQ6WBX8 426 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 TAS2R42Q7RTR8 314 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 SNX20Q7Z614 316 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 FGD2Q7Z6J4 655 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms