RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 MAN2B2Q9Y2E5 1009 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 PCDHGA6Q9Y5G7 932 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 PSAT1Q9Y617 370 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 MGAQ8IWI9 3026 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 A0A1W2PPV9 198 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 GFYI3L273 518 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 SLC16A5O15375 505 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 HCRTR1O43613 425 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 GSTA2P09210 222 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 ERGP11308 486 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 SFTPCP11686 197 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 STX2P32856 288 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 RORAP35398 523 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 DCDP81605 110 aaKnown RBP14.64□□□□□ -0.07
SMG6-220ENST00000576218 C19orf57Q0VDD7 668 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 COL9A2Q14055 689 aaPredicted RBP14.64□□□□□ -0.07
SMG6-220ENST00000576218 GRM7Q14831 915 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 SLC9A5Q14940 896 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 ICE2Q659A1 982 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 RHBDD2Q6NTF9 364 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 CYHR1Q6ZMK1 362 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 C3orf62Q6ZUJ4 267 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 TTLL10Q6ZVT0 673 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 FRA10AC1Q70Z53 315 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 SYVN1Q86TM6 617 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 ZC3HC1Q86WB0 502 aaKnown RBP14.64□□□□□ -0.07
SMG6-220ENST00000576218 OR2A1Q8NGT9 310 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 APOBEC4Q8WW27 367 aaKnown RBP14.64□□□□□ -0.07
SMG6-220ENST00000576218 RERGQ96A58 199 aaPredicted RBP14.64□□□□□ -0.07
SMG6-220ENST00000576218 RUFY1Q96T51 708 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 RHOJQ9H4E5 214 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 ARL15Q9NXU5 204 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 MOCS1Q9NZB8 636 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 IFT80Q9P2H3 777 aaPredicted RBP14.64□□□□□ -0.07
SMG6-220ENST00000576218 ANKMY1Q9P2S6 941 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 MTRF1LQ9UGC7 380 aaKnown RBP14.64□□□□□ -0.07
SMG6-220ENST00000576218 ADAMTS6Q9UKP5 1117 aa14.64□□□□□ -0.07
SMG6-220ENST00000576218 PRICKLE3O43900 615 aaPredicted RBP14.63□□□□□ -0.07
SMG6-220ENST00000576218 PIAS1O75925 651 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 RAB40ALP0C0E4 278 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 IMPA1P29218 277 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 MAGEA4P43358 317 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 GABRA4P48169 554 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 POLE2P56282 527 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 TBPL1P62380 186 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 ABATP80404 500 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 NCF4Q15080 339 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 FAM214AQ32MH5 1076 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 CRTC2Q53ET0 693 aaPredicted RBP14.63□□□□□ -0.07
SMG6-220ENST00000576218 PRAMEF13Q5VWM6 474 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 CEP128Q6ZU80 1094 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 NKAPQ8N5F7 415 aaKnown RBP14.63□□□□□ -0.07
SMG6-220ENST00000576218 TSPAN17Q96FV3 270 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 OLFM1Q99784 485 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 ZFYVE21Q9BQ24 234 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 NLNQ9BYT8 704 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 PHACTR1Q9C0D0 580 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 PCBD2Q9H0N5 130 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 ATG10Q9H0Y0 220 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 GPAMQ9HCL2 828 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 SLC6A20Q9NP91 592 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 STARD5Q9NSY2 213 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 CUTCQ9NTM9 273 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 STOX2Q9P2F5 926 aaPredicted RBP14.63□□□□□ -0.07
SMG6-220ENST00000576218 PDE10AQ9Y233 779 aa14.63□□□□□ -0.07
SMG6-220ENST00000576218 HEMK1Q9Y5R4 338 aaPredicted RBP14.63□□□□□ -0.07
SMG6-220ENST00000576218 A0A1B0GX78 115 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 TCRBV9S1A1TA0A576 114 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 E7ENX8 843 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 TERTO14746 1132 aaKnown RBP14.62□□□□□ -0.07
SMG6-220ENST00000576218 SRPX2O60687 465 aaPredicted RBP14.62□□□□□ -0.07
SMG6-220ENST00000576218 CTSVO60911 334 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 GUCA1CO95843 209 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 CTSBP07858 339 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 PIM1P11309 404 aaPredicted RBP14.62□□□□□ -0.07
SMG6-220ENST00000576218 CCND1P24385 295 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 FOLR3P41439 243 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 PGGT1BP53609 377 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 TIAL1Q01085 375 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMG6-220ENST00000576218 TAP2Q03519 686 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 PRDX1Q06830 199 aaKnown RBP14.62□□□□□ -0.07
SMG6-220ENST00000576218 KCNAB2Q13303 367 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 SLMAPQ14BN4 828 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 LINC00303Q3SY05 128 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 WASHC2DQ5SRD0 308 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 YOD1Q5VVQ6 348 aaPredicted RBP14.62□□□□□ -0.07
SMG6-220ENST00000576218 LCN10Q6JVE6 187 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 CAPN13Q6MZZ7 669 aaPredicted RBP14.62□□□□□ -0.07
SMG6-220ENST00000576218 PCSK4Q6UW60 755 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 FAM198BQ6UWH4 519 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 MBOAT1Q6ZNC8 495 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 PPM1NQ8N819 430 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 ATL1Q8WXF7 558 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 CABS1Q96KC9 395 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 CPNE1Q99829 537 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 EGFL8Q99944 293 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 FAM117AQ9C073 453 aa14.62□□□□□ -0.07
SMG6-220ENST00000576218 NPEPPSL1A6NEC2 478 aa14.61□□□□□ -0.07
SMG6-220ENST00000576218 SNRNP200O75643 2136 aaKnown RBP14.61□□□□□ -0.07
SMG6-220ENST00000576218 CD63P08962 238 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms