RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ABHD2P08910 425 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 PRKAR1AP10644 381 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 ERGP11308 486 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 TCN2P20062 427 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 F8A1P23610 371 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 GRIA3P42263 894 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 GABRA4P48169 554 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 IL2P60568 153 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 ARHGAP19Q14CB8 494 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 TAF1BQ53T94 588 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-216ENST00000575599 FCRL6Q6DN72 434 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 FAM199XQ6PEV8 388 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-216ENST00000575599 FIGLAQ6QHK4 219 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 DNAJC22Q8N4W6 341 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 GOLGA6L1Q8N7Z2 621 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 SLC38A9Q8NBW4 561 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 FBXO15Q8NCQ5 510 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-216ENST00000575599 FBF1Q8TES7 1133 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 ZNF480Q8WV37 535 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 SLC45A3Q96JT2 553 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 CYTH2Q99418 400 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 SLC12A9Q9BXP2 914 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 CHRNA10Q9GZZ6 450 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 SPRTNQ9H040 489 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-216ENST00000575599 AKIRIN1Q9H9L7 192 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-216ENST00000575599 TXNDC16Q9P2K2 825 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 TAC3Q9UHF0 121 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 PLCL2Q9UPR0 1127 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 SPTBP11277 2137 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 ITPR1Q14643 2758 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 FAM208BQ5VWN6 2430 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 EXOC1LA0A1B0GW35 172 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 GOLGA6L10A6NI86 522 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 CXorf49A8MYA2 514 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 ERVH48-1M5A8F1 160 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 NKX2-8O15522 239 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 ZSCAN9O15535 394 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 ATP8B1O43520 1251 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 NRP2O60462 931 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 FKBP9O95302 570 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 TSPAN12O95859 305 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 KLK3P07288 261 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 CMPK1P30085 196 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 HSD17B2P37059 387 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 GPX6P59796 221 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 YBX1P67809 324 aaKnown RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 SP140Q13342 867 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 DNASE1L3Q13609 305 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 ZNF460Q14592 562 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 UAP1Q16222 522 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 PTCHD3Q3KNS1 767 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 THEMIS2Q5TEJ8 643 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 C16orf46Q6P387 395 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 MBOAT1Q6ZNC8 495 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 CROCCP2Q86T23 111 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 CTAGE3PQ8IX95 158 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 ZNF655Q8N720 491 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 OR2A1Q8NGT9 310 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 MCOLN3Q8TDD5 553 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 DLG3Q92796 817 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 VPS39Q96JC1 886 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 RHOJQ9H4E5 214 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 VIPAS39Q9H9C1 493 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 MRPS30Q9NP92 439 aaKnown RBP12.73□□□□□ -0.37
RPAIN-216ENST00000575599 PCMTD2Q9NV79 361 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 EURLQ9NYK6 297 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 PDE10AQ9Y233 779 aa12.73□□□□□ -0.37
RPAIN-216ENST00000575599 PABPN1LA6NDY0 278 aaKnown RBP12.72□□□□□ -0.37
RPAIN-216ENST00000575599 E7ENX8 843 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 POC1B-GALNT4F8VUJ3 575 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 MEN1O00255 615 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 NUDT17P0C025 328 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 ZNF37AP17032 561 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-216ENST00000575599 IMPA1P29218 277 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 RORAP35398 523 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 SLC12A2P55011 1212 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 TAS2R39P59534 338 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 TAP2Q03519 686 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 PHKG1Q16816 387 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 SOWAHCQ53LP3 525 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-216ENST00000575599 ZC3H12BQ5HYM0 836 aaKnown RBP12.72□□□□□ -0.37
RPAIN-216ENST00000575599 ATP1A1-AS1Q5TC04 95 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 LRIG3Q6UXM1 1119 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 MCATQ8IVS2 390 aaKnown RBP12.72□□□□□ -0.37
RPAIN-216ENST00000575599 DSELQ8IZU8 1212 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 TTC9Q92623 222 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 EXTL1Q92935 676 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 LRFN5Q96NI6 719 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 CPNE1Q99829 537 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 DPH7Q9BTV6 452 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 FUT8Q9BYC5 575 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 CHST8Q9H2A9 424 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 PARVBQ9HBI1 364 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 SLC6A20Q9NP91 592 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 STOX2Q9P2F5 926 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-216ENST00000575599 KCND3Q9UK17 655 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
RPAIN-216ENST00000575599 A0A0J9YVX5 310 aa12.71□□□□□ -0.37
RPAIN-216ENST00000575599 TLDC2A0PJX2 215 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms