RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 KLK4Q9Y5K2 254 aa19.88■□□□□ 0.77
HCFC1R1-208ENST00000575214 SNRNP200O75643 2136 aaKnown RBP19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 H3BMH7 237 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 TERTO14746 1132 aaKnown RBP19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 NKX2-8O15522 239 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 C1QAP02745 245 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 RORAP35398 523 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 MC1RQ01726 317 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 POU4F1Q01851 419 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 PTCHD3Q3KNS1 767 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 ICE2Q659A1 982 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 C16orf46Q6P387 395 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 CEP97Q8IW35 865 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 LRRC56Q8IYG6 542 aaPredicted RBP19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 TTC9Q92623 222 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 PDLIM5Q96HC4 596 aaKnown RBP19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 SELENOSQ9BQE4 189 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 TRIM54Q9BYV2 358 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 CHST8Q9H2A9 424 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 GPAMQ9HCL2 828 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 CCDC177Q9NQR7 707 aaPredicted RBP19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 SRPK3Q9UPE1 567 aa19.87■□□□□ 0.77
HCFC1R1-208ENST00000575214 A0A0J9YVX5 310 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 NRP2O60462 931 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 CTSVO60911 334 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 TBPL1P62380 186 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 RPS15P62841 145 aaKnown RBP19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 PRDX1Q06830 199 aaKnown RBP19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 CDC20Q12834 499 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 COL9A2Q14055 689 aaPredicted RBP19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 USP10Q14694 798 aaKnown RBP19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 AGTRAPQ6RW13 159 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 TSPAN17Q96FV3 270 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 MED8Q96G25 268 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 BBC3Q96PG8 261 aaPredicted RBP19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 RUFY1Q96T51 708 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 FMO2Q99518 471 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 GPR22Q99680 433 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 NDC1Q9BTX1 674 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 CAB39LQ9H9S4 337 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 TXLNGQ9NUQ3 528 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 ARL15Q9NXU5 204 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 ANKMY1Q9P2S6 941 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 PCDHGA6Q9Y5G7 932 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 ATRXP46100 2492 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 SPTBP11277 2137 aa19.86■□□□□ 0.77
HCFC1R1-208ENST00000575214 MGAQ8IWI9 3026 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 OR2A25A4D2G3 310 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ATXN7O15265 892 aaPredicted RBP19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ATXN8OSP0DMR3 200 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 AGXTP21549 392 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 SPRP35270 261 aaPredicted RBP19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ABATP80404 500 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 EFTUD2Q15029 972 aaKnown RBP eCLIP19.85■□□□□ 0.775e-6■■■■□ 19.4
HCFC1R1-208ENST00000575214 TCTE1Q5JU00 501 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 GRTP1Q5TC63 336 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 C1orf189Q5VU69 101 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 LCN10Q6JVE6 187 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 RHBDD2Q6NTF9 364 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ZNF517Q6ZMY9 492 aaPredicted RBP19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 RNF44Q7L0R7 432 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ADCK2Q7Z695 626 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 EXTL1Q92935 676 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ALKBH8Q96BT7 664 aaKnown RBP19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 PLCD4Q9BRC7 762 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 GPR87Q9BY21 358 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 TSPYL1Q9H0U9 437 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ATG10Q9H0Y0 220 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 ACTL8Q9H568 366 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 POPDC3Q9HBV1 291 aa19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 UTP6Q9NYH9 597 aaKnown RBP19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 DHCR7Q9UBM7 475 aaKnown RBP19.85■□□□□ 0.77
HCFC1R1-208ENST00000575214 IGKV1-8A0A0C4DH67 115 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 NPEPPSL1A6NEC2 478 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 FAM155BO75949 473 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 GUCA1CO95843 209 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 ITGB2P05107 769 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 ENO2P09104 434 aaPredicted RBP19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 PTPN4P29074 926 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 PHBP35232 272 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 AP1S2P56377 157 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 VSX2P58304 361 aaPredicted RBP19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 RPS18P62269 152 aaKnown RBP19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 NAB1Q13506 487 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 NAE1Q13564 534 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 ERV3-1Q14264 604 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 SOWAHCQ53LP3 525 aaPredicted RBP19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 ATP1A1-AS1Q5TC04 95 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 PRAMEF13Q5VWM6 474 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 FRMPD2BQ6IN97 320 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 TTC29Q8NA56 475 aaPredicted RBP19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 PROKR1Q8TCW9 393 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 ANKRD49Q8WVL7 239 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 ZFYVE21Q9BQ24 234 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 DPH2Q9BQC3 489 aaPredicted RBP19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 PCBD2Q9H0N5 130 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 STARD5Q9NSY2 213 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 NINJ2Q9NZG7 142 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 IKZF3Q9UKT9 509 aa19.84■□□□□ 0.77
HCFC1R1-208ENST00000575214 FARSAQ9Y285 508 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms