RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 RNF217Q8TC41 542 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CSGALNACT1Q8TDX6 532 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF689Q96CS4 500 aaPredicted RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CCDC138Q96M89 665 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF641Q96N77 438 aaPredicted RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 NODALQ96S42 347 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 BARD1Q99728 777 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 BEGAINQ9BUH8 593 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 FUNDC2Q9BWH2 189 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 BRD9Q9H8M2 597 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 TM9SF3Q9HD45 589 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 IL1RAPQ9NPH3 570 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 B4GALT6Q9UBX8 382 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 SNX5Q9Y5X3 404 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 U3KQV3 271 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 EVPLLA8MZ36 301 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 M0QX08 132 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 LEFTY2O00292 366 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 FPGTO14772 594 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 PRMT3O60678 531 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 UGT2B11O75310 529 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 KCNK5O95279 499 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 PARNO95453 639 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 POP4O95707 220 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 GNRH1P01148 92 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ITPKAP23677 461 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 IGFBP5P24593 272 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 HLA-FP30511 346 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 DAPP51397 102 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 BMXP51813 675 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 GP2P55259 537 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF33BQ06732 778 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ABRQ12979 859 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CSTF3Q12996 717 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 AQP6Q13520 282 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 UGT8Q16880 541 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 LIPJQ5W064 366 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 OR2T5Q6IEZ7 315 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 SERPINA13PQ6UXR4 307 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 DPY19L3Q6ZPD9 716 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CEP68Q76N32 757 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 GPR155Q7Z3F1 870 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ANKRD13BQ86YJ7 626 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CMTM8Q8IZV2 173 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 RNF175Q8N4F7 328 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CPA6Q8N4T0 437 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 PIK3C3Q8NEB9 887 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 OR2T29Q8NH02 315 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 GIPC3Q8TF64 312 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 SKA2Q8WVK7 121 aaPredicted RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 TRUB1Q8WWH5 349 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 FBXL8Q96CD0 374 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 EBPLQ9BY08 206 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CEP44Q9C0F1 390 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 REXO4Q9GZR2 422 aaKnown RBP8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ZDHHC6Q9H6R6 413 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 PALMDQ9NP74 551 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 AASDHPPTQ9NRN7 309 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 EXD2Q9NVH0 621 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ENPP5Q9UJA9 477 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 BAG5Q9UL15 447 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 ABCG2Q9UNQ0 655 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 PCDHGB1Q9Y5G3 927 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 MICAL3Q7RTP6 2002 aa8.68□□□□□ -1.02
NCBP3-204ENST00000574911 CLIC1O00299 241 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 GRM6O15303 877 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 TEX28O15482 410 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SGTAO43765 313 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 BNIP3LO60238 219 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 LILRB3O75022 631 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 BCAS1O75363 584 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CLPXO76031 633 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 INMTO95050 263 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ENGP17813 658 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 GPX2P18283 190 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 HTR1BP28222 390 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 HALP42357 657 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CLK3P49761 638 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 MLLT10P55197 1068 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 C21orf58P58505 322 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SRSF11Q05519 484 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CHIT1Q13231 466 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 RAPSNQ13702 412 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 KCNC3Q14003 757 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 KEAP1Q14145 624 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SPCS2Q15005 226 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 VMACQ2NL98 169 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 KDM4DQ6B0I6 523 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ASTLQ6HA08 431 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ZCCHC8Q6NZY4 707 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF554Q86TJ5 538 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 PTOV1Q86YD1 416 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CHST14Q8NCH0 376 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 OR7A2PQ8NGA2 310 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 WDR20Q8TBZ3 569 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 MCOLN3Q8TDD5 553 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 RAD21L1Q9H4I0 556 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CREBZFQ9NS37 354 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CD84Q9UIB8 345 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms