RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PGGT1BP53609 377 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 SH3BP2P78314 561 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 TAP2Q03519 686 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 KCNC4Q03721 635 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 TUBB3Q13509 450 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 TSTA3Q13630 321 aaPredicted RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 CSHL1Q14406 222 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 FAM83EQ2M2I3 478 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHD3-216ENST00000573936 ZC3H12BQ5HYM0 836 aaKnown RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 ARHGAP40Q5TG30 622 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 FIGLAQ6QHK4 219 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 ADGRD1Q6QNK2 874 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 DCAKDQ8WVC6 231 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 UBLCP1Q8WVY7 318 aaPredicted RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 FBXL8Q96CD0 374 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 MTBPQ96DY7 904 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 UBXN10Q96LJ8 280 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 PPM1MQ96MI6 270 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 DPH1Q9BZG8 443 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 MRPS30Q9NP92 439 aaKnown RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 CCDC177Q9NQR7 707 aaPredicted RBP10.62□□□□□ -0.71
CHD3-216ENST00000573936 SNX15Q9NRS6 342 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 FGF21Q9NSA1 209 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 KLK4Q9Y5K2 254 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 B3GALT1Q9Y5Z6 326 aa10.62□□□□□ -0.71
CHD3-216ENST00000573936 A0A096LPK6 155 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 IQANK1A0A1B0GTG1 560 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CCDC151A5D8V7 595 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 KRT87PA6NCN2 255 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 NPEPPSL1A6NEC2 478 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 STMND1H3BQB6 276 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CDC7O00311 574 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 MT-ND3P03897 115 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 C2P06681 752 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 LIPCP11150 499 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 PVRP15151 417 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CD1DP15813 335 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 GRIA3P42263 894 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 HNMTP50135 292 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 PRDX1Q06830 199 aaKnown RBP10.61□□□□□ -0.71
CHD3-216ENST00000573936 BMPR2Q13873 1038 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 PHKG1Q16816 387 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CDKL4Q5MAI5 379 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 THEMIS2Q5TEJ8 643 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 KIAA1614Q5VZ46 1190 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CAPN13Q6MZZ7 669 aaPredicted RBP10.61□□□□□ -0.71
CHD3-216ENST00000573936 EMBQ6PCB8 327 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 AGTRAPQ6RW13 159 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 SUSD1Q6UWL2 747 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 SBSNQ6UWP8 590 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CMC1Q7Z7K0 106 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 TRIM73Q86UV7 250 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 GPSM1Q86YR5 675 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 LRRC56Q8IYG6 542 aaPredicted RBP10.61□□□□□ -0.71
CHD3-216ENST00000573936 TCAIMQ8N3R3 496 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 PPFIBP2Q8ND30 876 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 OR2L3Q8NG85 312 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 OR2A1Q8NGT9 310 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 STAG3L4Q8TBR4 150 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CAVIN3Q969G5 261 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 ISL2Q96A47 359 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 KIAA1191Q96A73 305 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 WBP1Q96G27 269 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CABS1Q96KC9 395 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 MIPEPQ99797 713 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CTRCQ99895 268 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 EGFL8Q99944 293 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 HAUS8Q9BT25 410 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 DHRS4Q9BTZ2 278 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 KLHL25Q9H0H3 589 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 CLMPQ9H6B4 373 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 APMAPQ9HDC9 416 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 SNX7Q9UNH6 387 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 PLCL2Q9UPR0 1127 aa10.61□□□□□ -0.71
CHD3-216ENST00000573936 HMX2A2RU54 273 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 B8ZZF3 427 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 TMEM150CB9EJG8 249 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.6□□□□□ -0.71
CHD3-216ENST00000573936 GUCA1CO95843 209 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 S100BP04271 92 aaPredicted RBP10.6□□□□□ -0.71
CHD3-216ENST00000573936 HBQ1P09105 142 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 SLC35E2BP0CK96 405 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 COL6A2P12110 1019 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 H2AFXP16104 143 aaPredicted RBP10.6□□□□□ -0.71
CHD3-216ENST00000573936 MAGP20916 626 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 PSMB5P28074 263 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 CSRP3P50461 194 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 ITGA1P56199 1179 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 NAE1Q13564 534 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 MAP7Q14244 749 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 KCNAB1Q14722 419 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 ACAP2Q15057 778 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 TGFBIQ15582 683 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 TSNQ15631 228 aaKnown RBP10.6□□□□□ -0.71
CHD3-216ENST00000573936 GPR19Q15760 415 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 PPP1R3AQ16821 1122 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 ICE2Q659A1 982 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms