RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 C3AR1Q16581 482 aa18.9■□□□□ 0.62
CCDC40-206ENST00000572083 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.9■□□□□ 0.62
CCDC40-206ENST00000572083 DNAJB8Q8NHS0 232 aa18.9■□□□□ 0.62
CCDC40-206ENST00000572083 SUN3Q8TAQ9 357 aa18.9■□□□□ 0.62
CCDC40-206ENST00000572083 YIPF2Q9BWQ6 316 aa18.9■□□□□ 0.62
CCDC40-206ENST00000572083 LRRC40Q9H9A6 602 aa18.9■□□□□ 0.62
CCDC40-206ENST00000572083 TFR2Q9UP52 801 aa18.9■□□□□ 0.62
CCDC40-206ENST00000572083 NCOA6Q14686 2063 aaPredicted RBP18.89■□□□□ 0.62
CCDC40-206ENST00000572083 IGLV3-12A0A075B6K2 115 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 MROH6A6NGR9 719 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 IQCF5A8MTL0 148 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 PRICKLE3O43900 615 aaPredicted RBP18.89■□□□□ 0.61
CCDC40-206ENST00000572083 ESRRAP11474 423 aaPredicted RBP18.89■□□□□ 0.61
CCDC40-206ENST00000572083 EMP2P54851 167 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 CASP6P55212 293 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 UNC5DQ6UXZ4 953 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 CDH24Q86UP0 819 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 ZUFSPQ96AP4 578 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 RIC8BQ9NVN3 520 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 TRPC4Q9UBN4 977 aa18.89■□□□□ 0.61
CCDC40-206ENST00000572083 OR5H15A6NDH6 313 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 TARM1B6A8C7 271 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 PRAMEF2O60811 474 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 METTL18O95568 372 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 ERVK-10P10266 1014 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 COPS2P61201 443 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 ZNF33BQ06732 778 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 MUM1Q2TAK8 710 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 C11orf63Q6NUN7 778 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 RIPOR1Q6ZS17 1223 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 NEK10Q6ZWH5 1172 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 RNF44Q7L0R7 432 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 TAB3Q8N5C8 712 aaPredicted RBP18.88■□□□□ 0.61
CCDC40-206ENST00000572083 ASZ1Q8WWH4 475 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 MTFMTQ96DP5 389 aaKnown RBP18.88■□□□□ 0.61
CCDC40-206ENST00000572083 CABS1Q96KC9 395 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 OSBPL8Q9BZF1 889 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 RNF32Q9H0A6 362 aa18.88■□□□□ 0.61
CCDC40-206ENST00000572083 A0A1W2PQ72 361 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 GPC4O75487 556 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 GOT2P00505 430 aaKnown RBP18.87■□□□□ 0.61
CCDC40-206ENST00000572083 HEXBP07686 556 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 PSMA3P25788 255 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 KIR3DL1P43629 444 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 BDKRB1P46663 353 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 SMSP52788 366 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 YBX1P67809 324 aaKnown RBP18.87■□□□□ 0.61
CCDC40-206ENST00000572083 PCOLCEQ15113 449 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 CCSMST1Q4G0I0 132 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 ABHD17BQ5VST6 288 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 AADACL2Q6P093 401 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 SPNS3Q6ZMD2 512 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 NCCRP1Q6ZVX7 275 aaPredicted RBP18.87■□□□□ 0.61
CCDC40-206ENST00000572083 CEP97Q8IW35 865 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 KRT222Q8N1A0 295 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 OR2L3Q8NG85 312 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 OR13J1Q8NGT2 312 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 MAGED4Q96JG8 741 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 RAB11FIP5Q9BXF6 653 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 SLC2A6Q9UGQ3 507 aa18.87■□□□□ 0.61
CCDC40-206ENST00000572083 RUVBL2Q9Y230 463 aaKnown RBP18.87■□□□□ 0.61
CCDC40-206ENST00000572083 CACNA1CQ13936 2221 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 F8W8V4 182 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 DIAPH2O60879 1101 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 FKBP9O95302 570 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 CLDN14O95500 239 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 APOA4P06727 396 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 TPM1P09493 284 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 AGAP20933 346 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 CTNNA1P35221 906 aaKnown RBP18.86■□□□□ 0.61
CCDC40-206ENST00000572083 DSG2Q14126 1118 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 SEMA3AQ14563 771 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 PARP6Q2NL67 630 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 AFTPHQ6ULP2 937 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 FAM71DQ8N9W8 422 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 ADAMTS18Q8TE60 1221 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 HDAC10Q969S8 669 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 TTC1Q99614 292 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 TSSK1BQ9BXA7 367 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 TSPAN10Q9H1Z9 355 aaPredicted RBP18.86■□□□□ 0.61
CCDC40-206ENST00000572083 C14orf105Q9NVL8 296 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 EFR3BQ9Y2G0 817 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 KLK4Q9Y5K2 254 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 NFS1Q9Y697 457 aa18.86■□□□□ 0.61
CCDC40-206ENST00000572083 FAM227AF5H4B4 570 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 ANP32AP39687 249 aaKnown RBP18.85■□□□□ 0.61
CCDC40-206ENST00000572083 MAGEA1P43355 309 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 EFNA3P52797 238 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 KRTAP21-3Q3LHN1 58 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 ZNF766Q5HY98 468 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 TTC23LQ6PF05 361 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 AMER3Q8N944 861 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 SKA2Q8WVK7 121 aaPredicted RBP18.85■□□□□ 0.61
CCDC40-206ENST00000572083 ZFYVE21Q9BQ24 234 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 CARD6Q9BX69 1037 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 ZNF700Q9H0M5 742 aa18.85■□□□□ 0.61
CCDC40-206ENST00000572083 AOAHP28039 575 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 PTPN7P35236 360 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 TLE4Q04727 773 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 TMED2Q15363 201 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms