RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 PKMP14618 531 aaKnown RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 CD9P21926 228 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 GGT2P36268 569 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 ITGA1P56199 1179 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 FCHO2Q0JRZ9 810 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 TRIM71Q2Q1W2 868 aaKnown RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 TTLL9Q3SXZ7 439 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 INO80DQ53TQ3 878 aaPredicted RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 GPR153Q6NV75 609 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 Q6ZPB1 254 aaPredicted RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 CACTIN-AS1Q8N1I8 211 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 PGBD3Q8N328 593 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 SCAMP5Q8TAC9 235 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 ROGDIQ9GZN7 287 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 REEP1Q9H902 201 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 TXNRD2Q9NNW7 524 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 DYRK4Q9NR20 520 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 NUFIP1Q9UHK0 495 aaKnown RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 TNPO3Q9Y5L0 923 aaKnown RBP16.36■□□□□ 0.21
LITAF-209ENST00000571688 PCM1Q15154 2024 aa16.36■□□□□ 0.21
LITAF-209ENST00000571688 EPOP01588 193 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 CD72P21854 359 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 BAK1Q16611 211 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 CTSL3PQ5NE16 218 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 MILR1Q7Z6M3 343 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 VTCN1Q7Z7D3 282 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 RMDN1Q96DB5 314 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 CRELD1Q96HD1 420 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 INPP5KQ9BT40 448 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 IPPKQ9H8X2 491 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 OLA1Q9NTK5 396 aaKnown RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 GPR83Q9NYM4 423 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 UBA2Q9UBT2 640 aaPredicted RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 ZMYM5Q9UJ78 669 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 PLK4O00444 970 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 C9P02748 559 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 NUDT1P36639 197 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 GNPDA1P46926 289 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 PXNP49023 591 aaPredicted RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 PGFP49763 221 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 CDKN1CP49918 316 aaPredicted RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 HMGCS1Q01581 520 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 SLC14A1Q13336 389 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 USP39Q53GS9 565 aaKnown RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 C10orf62Q5T681 223 aaPredicted RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 RNF165Q6ZSG1 346 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 ZNF683Q8IZ20 524 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 GALNT6Q8NCL4 622 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 OR5H6Q8NGV6 325 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 CLHC1Q8NHS4 586 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 ASB15Q8WXK1 588 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 CEP295NLQ96MC4 621 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 KCNC2Q96PR1 638 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 RUBCNLQ9H714 662 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 PRDM5Q9NQX1 630 aaPredicted RBP16.35■□□□□ 0.21
LITAF-209ENST00000571688 DNMT3LQ9UJW3 386 aa16.35■□□□□ 0.21
LITAF-209ENST00000571688 SLC28A1O00337 649 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 TFECO14948 347 aaPredicted RBP16.34■□□□□ 0.21
LITAF-209ENST00000571688 ZNF780AO75290 641 aaPredicted RBP16.34■□□□□ 0.21
LITAF-209ENST00000571688 CYP7B1O75881 506 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 RHOQP17081 205 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 CDC42EP1Q00587 391 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ARHGEF6Q15052 776 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ZNF79Q15937 498 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ZMAT1Q5H9K5 638 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 GNASQ5JWF2 1037 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ZNF367Q7RTV3 350 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 LIX1LQ8IVB5 337 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ZFAND1Q8TCF1 268 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 TMEM40Q8WWA1 233 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ZFP42Q96MM3 310 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 CITED4Q96RK1 184 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 MMP28Q9H239 520 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 TMEM248Q9NWD8 314 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 MIOSQ9NXC5 875 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 TOR4AQ9NXH8 423 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 KLHL20Q9Y2M5 609 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 PRKACBP22694 351 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 CDKN2CP42773 168 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 NUDT6P53370 316 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 HYAL2Q12891 473 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 EIF4HQ15056 248 aaKnown RBP16.34■□□□□ 0.21
LITAF-209ENST00000571688 TIMM50Q3ZCQ8 353 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ATCAYQ86WG3 371 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 RNF130Q86XS8 419 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 FAM20CQ8IXL6 584 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 STX19Q8N4C7 294 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 POLR1EQ9GZS1 481 aaKnown RBP16.34■□□□□ 0.21
LITAF-209ENST00000571688 FARSBQ9NSD9 589 aaKnown RBP16.34■□□□□ 0.21
LITAF-209ENST00000571688 RPS6KA6Q9UK32 745 aa16.34■□□□□ 0.21
LITAF-209ENST00000571688 ZNF490Q9ULM2 529 aaPredicted RBP16.34■□□□□ 0.21
LITAF-209ENST00000571688 PBX3P40426 434 aa16.33■□□□□ 0.21
LITAF-209ENST00000571688 MLLT3P42568 568 aaPredicted RBP16.33■□□□□ 0.21
LITAF-209ENST00000571688 PIK3CGP48736 1102 aa16.33■□□□□ 0.21
LITAF-209ENST00000571688 BNC1Q01954 994 aa16.33■□□□□ 0.21
LITAF-209ENST00000571688 TARDBPQ13148 414 aaKnown RBP eCLIP16.33■□□□□ 0.21
LITAF-209ENST00000571688 IQCCQ4KMZ1 466 aa16.33■□□□□ 0.21
LITAF-209ENST00000571688 ALFQ53S48 1182 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms