RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CBSLP0DN79 551 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 ENO3P13929 434 aaPredicted RBP12.85□□□□□ -0.35
CCDC40-205ENST00000571028 ATP5DP30049 168 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 CBSP35520 551 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 HSD17B3P37058 310 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 SLCO1A2P46721 670 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 EPHA4P54764 986 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 GFERP55789 205 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 FOXM1Q08050 763 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 EIF2S3LQ2VIR3 472 aaKnown RBP12.85□□□□□ -0.35
CCDC40-205ENST00000571028 FAM92BQ6ZTR7 304 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 UBE2R2Q712K3 238 aaPredicted RBP12.85□□□□□ -0.35
CCDC40-205ENST00000571028 TAOK1Q7L7X3 1001 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 AMIGO1Q86WK6 493 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 DCUN1D3Q8IWE4 304 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 OR2W6PQ8NHA6 318 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 DCAKDQ8WVC6 231 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 ANKRD49Q8WVL7 239 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 ZBTB9Q96C00 473 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 UCK1Q9HA47 277 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 SYTL2Q9HCH5 934 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 HRASLS2Q9NWW9 162 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 PDP2Q9P2J9 529 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 TBK1Q9UHD2 729 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 ADAMTS6Q9UKP5 1117 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 ICKQ9UPZ9 632 aa12.85□□□□□ -0.35
CCDC40-205ENST00000571028 CENPEQ02224 2701 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 TLDC2A0PJX2 215 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 PABPN1LA6NDY0 278 aaKnown RBP12.84□□□□□ -0.35
CCDC40-205ENST00000571028 NPEPPSL1A6NEC2 478 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 TRIM49D1C9J1S8 452 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 BTN3A1O00481 513 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 ZBTB14O43829 449 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 KDM1AO60341 852 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 KRT38O76015 456 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 MATN4O95460 622 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 CCDC166P0CW27 439 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 TPBGLP0DKB5 382 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 ZNF37AP17032 561 aaPredicted RBP12.84□□□□□ -0.35
CCDC40-205ENST00000571028 F8A1P23610 371 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 RAB10P61026 200 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 PPP1CAP62136 330 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 ILF2Q12905 390 aaKnown RBP12.84□□□□□ -0.35
CCDC40-205ENST00000571028 PRKAA1Q13131 559 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 CSHL1Q14406 222 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 NADK2Q4G0N4 442 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 KLHL35Q6PF15 583 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 FBXO38Q6PIJ6 1188 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 NEK10Q6ZWH5 1172 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 ARHGAP22Q7Z5H3 698 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 NKAPQ8N5F7 415 aaKnown RBP12.84□□□□□ -0.35
CCDC40-205ENST00000571028 ZFPM2Q8WW38 1151 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 VPS11Q9H270 941 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 UTP6Q9NYH9 597 aaKnown RBP12.84□□□□□ -0.35
CCDC40-205ENST00000571028 IKZF3Q9UKT9 509 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 RAB21Q9UL25 225 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 MAP4K5Q9Y4K4 846 aa12.84□□□□□ -0.35
CCDC40-205ENST00000571028 HMX2A2RU54 273 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 OR5K3A6NET4 321 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 ISM1B1AKI9 464 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 CDC7O00311 574 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 BTN3A3O00478 584 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.36
CCDC40-205ENST00000571028 PSIP1O75475 530 aaKnown RBP12.83□□□□□ -0.36
CCDC40-205ENST00000571028 RASSF9O75901 435 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 DNAJB5O75953 348 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 CLDN1O95832 211 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 TSPAN12O95859 305 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 PDGFAP04085 211 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 FURINP09958 794 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 CD9P21926 228 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 VARSP26640 1264 aaKnown RBP12.83□□□□□ -0.36
CCDC40-205ENST00000571028 GCAP28676 217 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 TYK2P29597 1187 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 SHMT2P34897 504 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 CCNFP41002 786 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 SERPINB9P50453 376 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 IFFO1Q0D2I5 559 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
CCDC40-205ENST00000571028 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.83□□□□□ -0.36
CCDC40-205ENST00000571028 LRRC8EQ6NSJ5 796 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 PLXDC1Q8IUK5 500 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 RASGRP3Q8IV61 690 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 GALNT6Q8NCL4 622 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 MAGEC3Q8TD91 643 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 ASB11Q8WXH4 323 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 CAVIN3Q969G5 261 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 RAD51AP1Q96B01 352 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 ALKBH8Q96BT7 664 aaKnown RBP12.83□□□□□ -0.36
CCDC40-205ENST00000571028 RNF31Q96EP0 1072 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 PKP4Q99569 1192 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 KLHL25Q9H0H3 589 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 TFB2MQ9H5Q4 396 aaKnown RBP12.83□□□□□ -0.36
CCDC40-205ENST00000571028 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 SNX15Q9NRS6 342 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms