RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ACTR8Q9H981 624 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 UCK1Q9HA47 277 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SEMA4BQ9NPR2 832 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 INTS7Q9NVH2 962 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 LRIT1Q9P2V4 623 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 PTBP2Q9UKA9 531 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 PCTPQ9UKL6 214 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 PADI4Q9UM07 663 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 ENTPD2Q9Y5L3 495 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 KCNE2Q9Y6J6 123 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 BPTFQ12830 3046 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 MUC3AQ02505 3323 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 PLXNB3Q9ULL4 1909 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR5K3A6NET4 321 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TARM1B6A8C7 271 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 E7ENX8 843 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRIM38O00635 465 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 E2F3O00716 465 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 KLF11O14901 512 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 NPHS1O60500 1241 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 RASSF9O75901 435 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 FKBP9O95302 570 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 PROS1P07225 676 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 VIMP08670 466 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHRM5P08912 532 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 SBK3P0C264 359 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TROVE2P10155 538 aaKnown RBP eCLIP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 ERGP11308 486 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 FGF3P11487 239 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 GNAZP19086 355 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 POLR2CP19387 275 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 HMOX2P30519 316 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 GRK3P35626 688 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 GPR3P46089 330 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC6A12P48065 614 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 KCNC1P48547 511 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC1A6P48664 564 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 ARL4DP49703 201 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 PKNOX1P55347 436 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 ABCE1P61221 599 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 PHEXP78562 749 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 GPLD1P80108 840 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 ABATP80404 500 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 IRF8Q02556 426 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TAP2Q03519 686 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CLCQ05315 142 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 BST1Q10588 318 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 POU4F2Q12837 409 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 KIR2DS3Q14952 304 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 SF1Q15637 639 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 C18orf21Q32NC0 220 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 AMZ1Q400G9 498 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 XKR6Q5GH73 641 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 PAGE2BQ5JRK9 111 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TTC19Q6DKK2 380 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 IRGCQ6NXR0 463 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 OGFOD3Q6PK18 319 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 LCTLQ6UWM7 567 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 FAM47EQ6ZV65 393 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 GPRIN3Q6ZVF9 776 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 EFL1Q7Z2Z2 1120 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 KANSL1Q7Z3B3 1105 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CRLF3Q8IUI8 442 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 RASGRP3Q8IV61 690 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 C2orf73Q8N5S3 287 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 Q8N9G6 341 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 FAM181AQ8N9Y4 354 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR56A3Q8NH54 315 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 HMGCLL1Q8TB92 370 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 AGR3Q8TD06 166 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRPC4APQ8TEL6 797 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF483Q8TF39 744 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CKAP2Q8WWK9 683 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC5A11Q8WWX8 675 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCT6BQ92526 530 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CNDP1Q96KN2 507 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 CNDP2Q96KP4 475 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 ACAT2Q9BWD1 397 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 GATA5Q9BWX5 397 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TBC1D10AQ9BXI6 508 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 IPPKQ9H8X2 491 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 MRPS30Q9NP92 439 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 HRASLS2Q9NWW9 162 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 GPRC5BQ9NZH0 403 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC22A14Q9Y267 594 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 FIS1Q9Y3D6 152 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 RNF215Q9Y6U7 377 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 LRRK1Q38SD2 2015 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRPM6Q9BX84 2022 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZDBF2Q9HCK1 2354 aa6.36□□□□□ -1.39
CTDNEP1-204ENST00000570484 NUMA1Q14980 2115 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 EML5Q05BV3 1969 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PRAMEF33A0A0G2JMD5 474 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 A0A0J9YY10 115 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC35F4A4IF30 521 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 LRRC14BA6NHZ5 514 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 FIGNL2A6NMB9 653 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 C4orf47A7E2U8 309 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 TCP11X1B4DZS4 312 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms