RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PRAMEF2O60811 474 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 SEC31AO94979 1220 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 OR2C1O95371 312 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 OLFM2O95897 454 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 OAS1P00973 400 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 CA3P07451 260 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 ERCC2P18074 760 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 POU1F1P28069 291 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 EPHB2P29323 1055 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 ATP5OP48047 213 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 AGTR2P50052 363 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 BLKP51451 505 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 CLCN4P51793 760 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 NDST2P52849 883 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 PITX1P78337 314 aaPredicted RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 GPM6BQ13491 265 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 SNX1Q13596 522 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 MORF4L2Q15014 288 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 TBC1D25Q3MII6 688 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 RAB6CQ53S08 254 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 RABL3Q5HYI8 236 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 RABGAP1LQ5R372 815 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 PPM1LQ5SGD2 360 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 SDHAF4Q5VUM1 108 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 PLPP4Q5VZY2 271 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 FAM47EQ6ZV65 393 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 Q6ZWC4 215 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 PARS2Q7L3T8 475 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 DNAJB7Q7Z6W7 309 aaPredicted RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 CROCCP2Q86T23 111 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 SFTPA1Q8IWL2 248 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 KIAA2013Q8IYS2 634 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 ADGRF3Q8IZF5 1079 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 GHDCQ8N2G8 530 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 CPEB3Q8NE35 698 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 MAFAQ8NHW3 353 aaPredicted RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 ART4Q93070 314 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 HDAC11Q96DB2 347 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 SAT2Q96F10 170 aaPredicted RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 TRIM51Q9BSJ1 452 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 CADM1Q9BY67 442 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 ZYG11BQ9C0D3 744 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 KLC2Q9H0B6 622 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 RAB6CQ9H0N0 254 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 SLC32A1Q9H598 525 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 SCPEP1Q9HB40 452 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 C20orf141Q9NUB4 165 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 ABCF3Q9NUQ8 709 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 GPATCH2LQ9NWQ4 482 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 OSER1Q9NX31 292 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 PPP4R1LQ9P1A2 415 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 LSM7Q9UK45 103 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 B3GNT3Q9Y2A9 372 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 PKP3Q9Y446 797 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 HEY1Q9Y5J3 304 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 C5orf60A6NFR6 353 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 CDRT15L2A8MXV6 281 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 E9PAM4 449 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 F5H5T6 163 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 AP3B1O00203 1094 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ZNF197O14709 1029 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 DSCR3O14972 297 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 CHADO15335 359 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 EIF3HO15372 352 aaKnown RBP eCLIP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 MSI1O43347 362 aaKnown RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 MFSD11O43934 449 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 GCATO75600 419 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 KAT7O95251 611 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 MBPP02686 304 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ALDOCP09972 364 aaKnown RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 IRF1P10914 325 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 PTPN2P17706 415 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 FDFT1P37268 417 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 HSPA9P38646 679 aaKnown RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 TNNT3P45378 269 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 KCNJ1P48048 391 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 SLC7A9P82251 487 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 SARNPP82979 210 aaKnown RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 CDK16Q00536 496 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 PPIDQ08752 370 aaKnown RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 PRKD1Q15139 912 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 CNGA3Q16281 694 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 C5orf22Q49AR2 442 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 PLAC9Q5JTB6 97 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 GKAP1Q5VSY0 366 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 KIAA1614Q5VZ46 1190 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ALS2CLQ60I27 953 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 VWA1Q6PCB0 445 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 IL27RAQ6UWB1 636 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 TMEM200AQ86VY9 491 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 PYROXD2Q8N2H3 581 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 LNX2Q8N448 690 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 RTL3Q8N8U3 475 aaKnown RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ZNF557Q8N988 423 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ABHD11Q8NFV4 315 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 GPR150Q8NGU9 434 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 GSDMBQ8TAX9 411 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 C2CD4CQ8TF44 421 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 HTR3CQ8WXA8 447 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 TTC25Q96NG3 672 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms