RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TAX1BP1Q86VP1 789 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 ZBTB2Q8N680 514 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 FAM45AQ8TCE6 357 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 ACMSDQ8TDX5 336 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 MR1Q95460 341 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 RAD51AP1Q96B01 352 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 CLIP3Q96DZ5 547 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 TCTN2Q96GX1 697 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 IL17FQ96PD4 163 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 AARSD1Q9BTE6 412 aaKnown RBP13.96□□□□□ -0.17
COMMD4-225ENST00000569245 IRAK4Q9NWZ3 460 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.96□□□□□ -0.17
COMMD4-225ENST00000569245 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 RUVBL2Q9Y230 463 aaKnown RBP13.96□□□□□ -0.17
COMMD4-225ENST00000569245 VWA7Q9Y334 891 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 PIEZO2Q9H5I5 2752 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 A0A0J9YY10 115 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 ALDOAP04075 364 aaKnown RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 KLK3P07288 261 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 CCR10P46092 362 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 BDKRB1P46663 353 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 MAGOHP61326 146 aaKnown RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 SLC18A2Q05940 514 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 CDC20Q12834 499 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 DNASE1L3Q13609 305 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 COL9A2Q14055 689 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 USP10Q14694 798 aaKnown RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 ZKSCAN8Q15776 578 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 RBM20Q5T481 1227 aaKnown RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 PRAMEF17Q5VTA0 474 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 FAM199XQ6PEV8 388 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 CDHR3Q6ZTQ4 885 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 MTERF4Q7Z6M4 381 aaKnown RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 GPR135Q8IZ08 494 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 GPATCH11Q8N954 259 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 C19orf47Q8N9M1 422 aaKnown RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 LMNTD1Q8N9Z9 388 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 OR1L3Q8NH93 324 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 MAGEC3Q8TD91 643 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 CT55Q8WUE5 264 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 SLC22A18Q96BI1 424 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 TSPAN17Q96FV3 270 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 MED8Q96G25 268 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 CATSPER2Q96P56 530 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 RAB11FIP5Q9BXF6 653 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 SEMA4CQ9C0C4 833 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 SSU72Q9NP77 194 aaKnown RBP13.95□□□□□ -0.18
COMMD4-225ENST00000569245 SNX15Q9NRS6 342 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 PIKFYVEQ9Y2I7 2098 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 ATRXP46100 2492 aa13.95□□□□□ -0.18
COMMD4-225ENST00000569245 FOXO6A8MYZ6 492 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 C21orf140B9A014 251 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 E7EQ34 232 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 C1orf105O95561 183 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 FDXRP22570 491 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 CRABP2P29373 138 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 TYK2P29597 1187 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 CCNFP41002 786 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 ITGA1P56199 1179 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 TAS2R39P59534 338 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 RAB10P61026 200 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 RPS15P62841 145 aaKnown RBP13.94□□□□□ -0.18
COMMD4-225ENST00000569245 ERV3-1Q14264 604 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 SF1Q15637 639 aaKnown RBP13.94□□□□□ -0.18
COMMD4-225ENST00000569245 SLC5A12Q1EHB4 618 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 DEFB109BQ30KR1 87 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 TTLL9Q3SXZ7 439 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 ATP1A1-AS1Q5TC04 95 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 FAM20CQ8IXL6 584 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 SRRM1Q8IYB3 904 aaKnown RBP13.94□□□□□ -0.18
COMMD4-225ENST00000569245 ZNF843Q8N446 348 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 EXD3Q8N9H8 876 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 LINC01555Q8NAE3 123 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 OR2L8Q8NGY9 312 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 KCNJ9Q92806 393 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 ALKBH8Q96BT7 664 aaKnown RBP13.94□□□□□ -0.18
COMMD4-225ENST00000569245 CABS1Q96KC9 395 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 NDNQ99608 321 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 ACTR5Q9H9F9 607 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-225ENST00000569245 AKIRIN1Q9H9L7 192 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-225ENST00000569245 POPDC3Q9HBV1 291 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 FAM60AQ9NP50 221 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 LATS2Q9NRM7 1088 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 GALPQ9UBC7 116 aa13.94□□□□□ -0.18
COMMD4-225ENST00000569245 MEN1O00255 615 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 C1QL1O75973 258 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 OR2B3O76000 313 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 MSL3P1P0C860 447 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 PYGBP11216 843 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 SFTPCP11686 197 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 STMN1P16949 149 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 KRT4P19013 534 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 PEBP1P30086 187 aaKnown RBP13.93□□□□□ -0.18
COMMD4-225ENST00000569245 SLC12A2P55011 1212 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 TIAL1Q01085 375 aaKnown RBP eCLIP13.93□□□□□ -0.18
COMMD4-225ENST00000569245 GRB7Q14451 532 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 ZIC1Q15915 447 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 DEFB110Q30KQ9 67 aa13.93□□□□□ -0.18
COMMD4-225ENST00000569245 ACSBG2Q5FVE4 666 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms