RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 KATNAL2Q8IYT4 538 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 C2orf73Q8N5S3 287 aaPredicted RBP11.86□□□□□ -0.51
SNX29-207ENST00000568949 LMNTD1Q8N9Z9 388 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 PHF10Q8WUB8 498 aaKnown RBP11.86□□□□□ -0.51
SNX29-207ENST00000568949 MVB12AQ96EY5 273 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 SPATA13Q96N96 652 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 IL17FQ96PD4 163 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 RAB11FIP5Q9BXF6 653 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 C10orf88Q9H8K7 445 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 STMN3Q9NZ72 180 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 ZC3H7BQ9UGR2 993 aaKnown RBP11.86□□□□□ -0.51
SNX29-207ENST00000568949 SLC39A10Q9ULF5 831 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 CDC14AQ9UNH5 594 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 NEU2Q9Y3R4 380 aa11.86□□□□□ -0.51
SNX29-207ENST00000568949 RASGRF2O14827 1237 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 TTI1O43156 1089 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 HEXBP07686 556 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 PMP22Q01453 160 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 DSG2Q14126 1118 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 SPARCL1Q14515 664 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 PCOLCEQ15113 449 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 PRTGQ2VWP7 1150 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 ZNF766Q5HY98 468 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 FRMPD2BQ6IN97 320 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 UNC5DQ6UXZ4 953 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 MEX3BQ6ZN04 569 aaKnown RBP11.85□□□□□ -0.51
SNX29-207ENST00000568949 RNF44Q7L0R7 432 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 CDKL3Q8IVW4 592 aaPredicted RBP11.85□□□□□ -0.51
SNX29-207ENST00000568949 ASZ1Q8WWH4 475 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 IMMP1LQ96LU5 166 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 C10orf90Q96M02 699 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 TGIF2Q9GZN2 237 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 TRPC4Q9UBN4 977 aa11.85□□□□□ -0.51
SNX29-207ENST00000568949 INTS1Q8N201 2190 aaKnown RBP11.84□□□□□ -0.51
SNX29-207ENST00000568949 LOC105369274A0A096LPK9 316 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 LOC102723532A0A0G2JNH3 316 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 A0A0J9YVX5 310 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 GPC4O75487 556 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 ERVK-10P10266 1014 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 HOXB4P17483 251 aaPredicted RBP11.84□□□□□ -0.51
SNX29-207ENST00000568949 MSNP26038 577 aaKnown RBP11.84□□□□□ -0.51
SNX29-207ENST00000568949 CCR7P32248 378 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 FOXN2P32314 431 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 CSE1LP55060 971 aaKnown RBP11.84□□□□□ -0.51
SNX29-207ENST00000568949 ALDH6A1Q02252 535 aaKnown RBP11.84□□□□□ -0.51
SNX29-207ENST00000568949 ZNF33BQ06732 778 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 HSPA14Q0VDF9 509 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 NAA25Q14CX7 972 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 KCTD11Q693B1 232 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 TMEM205Q6UW68 189 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 NEK10Q6ZWH5 1172 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 CCDC50Q8IVM0 306 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 OR4N4Q8N0Y3 316 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 EID3Q8N140 333 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNX29-207ENST00000568949 OR2L3Q8NG85 312 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 OR8K1Q8NGG5 319 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 ALS2CR12Q96Q35 445 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 TTC1Q99614 292 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 TUBB6Q9BUF5 446 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 MKKSQ9NPJ1 570 aaPredicted RBP11.84□□□□□ -0.51
SNX29-207ENST00000568949 INTUQ9ULD6 942 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 ALG6Q9Y672 507 aa11.84□□□□□ -0.51
SNX29-207ENST00000568949 FAM221AA4D161 298 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ASPDHA6ND91 283 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 RCCD1A6NED2 376 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 MROH6A6NGR9 719 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 E9PLN8 166 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 FAM227AF5H4B4 570 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 GOLGA6L19H0YKK7 550 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ZNF189O75820 626 aaPredicted RBP11.83□□□□□ -0.52
SNX29-207ENST00000568949 SLCO2B1O94956 709 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 NADKO95544 446 aaPredicted RBP11.83□□□□□ -0.52
SNX29-207ENST00000568949 EIF2S1P05198 315 aaKnown RBP11.83□□□□□ -0.52
SNX29-207ENST00000568949 CD99P14209 185 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 TPH1P17752 444 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 SLC26A3P40879 764 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ART1P52961 327 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 POU6F1Q14863 301 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 CCDC181Q5TID7 509 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 VRK3Q8IV63 474 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 RAB42Q8N4Z0 105 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 AMER3Q8N944 861 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 CFAP61Q8NHU2 1237 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 HMGCLL1Q8TB92 370 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ACTL9Q8TC94 416 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 CA5BP1Q8WTZ4 195 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 RAD51AP1Q96B01 352 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 CABS1Q96KC9 395 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ZNF354BQ96LW1 612 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 DMRTA2Q96SC8 542 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 DNAJC7Q99615 494 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 ZFYVE21Q9BQ24 234 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 VKORC1Q9BQB6 163 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 TMUB1Q9BVT8 246 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 YIPF2Q9BWQ6 316 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 CARD6Q9BX69 1037 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 TSSK1BQ9BXA7 367 aa11.83□□□□□ -0.52
SNX29-207ENST00000568949 HEMGNQ9BXL5 484 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms