RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SLC6A20Q9NP91 592 aa7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 SMYD2Q9NRG4 433 aa7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 NSMCE4AQ9NXX6 385 aa7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 TRMT6Q9UJA5 497 aaKnown RBP7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 TCFL5Q9UL49 500 aa7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 NOVA2Q9UNW9 492 aaKnown RBP7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 SRPK3Q9UPE1 567 aa7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 PDE10AQ9Y233 779 aa7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 UTP11Q9Y3A2 253 aaKnown RBP7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 PSAT1Q9Y617 370 aa7.85□□□□□ -1.15
HDGFL3-205ENST00000568129 KCNE1BA0A087WTH5 132 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 FAM159BA6NKW6 160 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 B8ZZF3 427 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 DSCR3O14972 297 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CEACAM4O75871 244 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ALBP02768 609 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 PRB1P04280 392 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 MCM3P25205 808 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 PSMB5P28074 263 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CMPK1P30085 196 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CCR10P46092 362 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 RGS4P49798 205 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CSRP3P50461 194 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 GPX6P59796 221 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 IL2P60568 153 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 RPS15P62841 145 aaKnown RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 DCDP81605 110 aaKnown RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 MRPS25P82663 173 aaKnown RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CKAP4Q07065 602 aaKnown RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 LY6DQ14210 128 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 SSPNQ14714 243 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 NCF4Q15080 339 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 WHAMMP3Q1A5X7 153 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ICE2Q659A1 982 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 UBE2R2Q712K3 238 aaPredicted RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 PIWIL4Q7Z3Z4 852 aaKnown RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ANKMY2Q8IV38 441 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ZBED8Q8IZ13 594 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 C2orf73Q8N5S3 287 aaPredicted RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ZNF655Q8N720 491 aaPredicted RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 FBXO25Q8TCJ0 367 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 MCOLN3Q8TDD5 553 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 PYROXD1Q8WU10 500 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 SKA2Q8WVK7 121 aaPredicted RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 MR1Q95460 341 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CLIP3Q96DZ5 547 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CFAP36Q96G28 342 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 OR2A5Q96R48 311 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 NDNQ99608 321 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 MIPEPQ99797 713 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 C17orf62Q9BQA9 187 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 DPH7Q9BTV6 452 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 FUT8Q9BYC5 575 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 FAM129AQ9BZQ8 928 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 PCBD2Q9H0N5 130 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 SLC25A18Q9H1K4 315 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 RHOJQ9H4E5 214 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 SYNPO2LQ9H987 977 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 POPDC3Q9HBV1 291 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 LRRC4CQ9HCJ2 640 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 SLC22A11Q9NSA0 550 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ZDHHC18Q9NUE0 388 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ZFATQ9P243 1243 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 STOX2Q9P2F5 926 aaPredicted RBP7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 SLC17A6Q9P2U8 582 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CIDEBQ9UHD4 219 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 ADAMTS6Q9UKP5 1117 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 POLHQ9Y253 713 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 KLHL20Q9Y2M5 609 aa7.84□□□□□ -1.15
HDGFL3-205ENST00000568129 CNTRLQ7Z7A1 2325 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 IGLV3-12A0A075B6K2 115 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 TCRBV9S1A1TA0A576 114 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 VSTM2BA6NLU5 285 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 CXorf49A8MYA2 514 aaPredicted RBP7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 KIF2AO00139 706 aaPredicted RBP7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 CNOT3O75175 753 aaKnown RBP7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 CCNDBP1O95273 360 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 ENO2P09104 434 aaPredicted RBP7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 NPPBP16860 134 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 ZNF37AP17032 561 aaPredicted RBP7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 AGXTP21549 392 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 CCND1P24385 295 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 SSTR1P30872 391 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 RPA3P35244 121 aaPredicted RBP7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 PMS2P54278 862 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 POLE2P56282 527 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 AP1S2P56377 157 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 SOX8P57073 446 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 CDKL1Q00532 357 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 POU4F1Q01851 419 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 IL10RAQ13651 578 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 ERV3-1Q14264 604 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 GRM7Q14831 915 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 PHKG1Q16816 387 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 PPP1R3AQ16821 1122 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 DEFB110Q30KQ9 67 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 FAM214AQ32MH5 1076 aa7.83□□□□□ -1.16
HDGFL3-205ENST00000568129 NKAIN1Q4KMZ8 207 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms