RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RPA3P35244 121 aaPredicted RBP12.97□□□□□ -0.33
CLK3-218ENST00000566926 TAS2R39P59534 338 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 FAM83EQ2M2I3 478 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 HHATQ5VTY9 493 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 KLC3Q6P597 504 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 SPESP1Q6UW49 350 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 TRIM42Q8IWZ5 723 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 LSM14AQ8ND56 463 aaKnown RBP12.97□□□□□ -0.33
CLK3-218ENST00000566926 TCP10LQ8TDR4 215 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 DENND1AQ8TEH3 1009 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 PITPNM3Q9BZ71 974 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 VPS11Q9H270 941 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 CCDC134Q9H6E4 229 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 PSD3Q9NYI0 1048 aa12.97□□□□□ -0.33
CLK3-218ENST00000566926 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 ISM1B1AKI9 464 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 EFSO43281 561 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 SPAG7O75391 227 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 KIAA0754O94854 1291 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 DLGAP3O95886 979 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 EBLN1P0CF75 366 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 SLC35E2BP0CK96 405 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 CREB1P16220 341 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 PKLRP30613 574 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 PDAP1Q13442 181 aaKnown RBP12.96□□□□□ -0.33
CLK3-218ENST00000566926 GBX1Q14549 363 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 SLC5A12Q1EHB4 618 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 C6orf15Q6UXA7 325 aaPredicted RBP12.96□□□□□ -0.33
CLK3-218ENST00000566926 NEK10Q6ZWH5 1172 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 VASH2Q86V25 355 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 ANKRD42Q8N9B4 389 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 RDH11Q8TC12 318 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
CLK3-218ENST00000566926 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
CLK3-218ENST00000566926 TRAPPC9Q96Q05 1148 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 NDNQ99608 321 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.33
CLK3-218ENST00000566926 GPAMQ9HCL2 828 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 LNPEPQ9UIQ6 1025 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 SERTAD3Q9UJW9 196 aa12.96□□□□□ -0.33
CLK3-218ENST00000566926 NBEAQ8NFP9 2946 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 CACNA1GO43497 2377 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 A0A0J9YY10 115 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 ERVH48-1M5A8F1 160 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 EIF3FO00303 357 aaPredicted RBP12.95□□□□□ -0.34
CLK3-218ENST00000566926 BIRC5O15392 142 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
CLK3-218ENST00000566926 KLHL2O95198 593 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 FKBP9O95302 570 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 C1orf105O95561 183 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 DHRS4L1P0CG22 281 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 ENO3P13929 434 aaPredicted RBP12.95□□□□□ -0.34
CLK3-218ENST00000566926 ST6GAL1P15907 406 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 UGT2B7P16662 529 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 SAT1P21673 171 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 KCNAB1Q14722 419 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 RBM20Q5T481 1227 aaKnown RBP12.95□□□□□ -0.34
CLK3-218ENST00000566926 LRRC8EQ6NSJ5 796 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 NKAPQ8N5F7 415 aaKnown RBP12.95□□□□□ -0.34
CLK3-218ENST00000566926 OR2L8Q8NGY9 312 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 RAB3IL1Q8TBN0 382 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 INPP5DQ92835 1189 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 WBP1Q96G27 269 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 TCTN2Q96GX1 697 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 OR2A14Q96R47 310 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 CHRNA10Q9GZZ6 450 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 CAB39LQ9H9S4 337 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 NMRAL1Q9HBL8 299 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 INTS7Q9NVH2 962 aaKnown RBP12.95□□□□□ -0.34
CLK3-218ENST00000566926 TRMT6Q9UJA5 497 aaKnown RBP12.95□□□□□ -0.34
CLK3-218ENST00000566926 PADI1Q9ULC6 663 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 DHRS7Q9Y394 339 aa12.95□□□□□ -0.34
CLK3-218ENST00000566926 EIF4E1BA6NMX2 242 aaKnown RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 ZNF839A8K0R7 811 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 ZNF891A8MT65 544 aaPredicted RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 FOXO6A8MYZ6 492 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 PHGDHO43175 533 aaKnown RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 CPNE3O75131 537 aaKnown RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 WISP3O95389 354 aaPredicted RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 MATN4O95460 622 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 CATP04040 527 aaKnown RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 RBP1P09455 135 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 LTA4HP09960 611 aaKnown RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 TPBGLP0DKB5 382 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 MPC1LP0DKB6 136 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 CBSLP0DN79 551 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 LIFP15018 202 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 ZNF37AP17032 561 aaPredicted RBP12.94□□□□□ -0.34
CLK3-218ENST00000566926 CBSP35520 551 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 STAT5AP42229 794 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 ETV4P43268 484 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 CLCN7P51798 805 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 PRKAA2P54646 552 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 ATP6V0D1P61421 351 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 CBX1P83916 185 aa12.94□□□□□ -0.34
CLK3-218ENST00000566926 MC1RQ01726 317 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms