RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SOX17Q9H6I2 414 aaPredicted RBP14.32□□□□□ -0.12
RNF40-209ENST00000566703 UTP6Q9NYH9 597 aaKnown RBP14.32□□□□□ -0.12
RNF40-209ENST00000566703 CTSFQ9UBX1 484 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 ZNF282Q9UDV7 671 aaPredicted RBP14.32□□□□□ -0.12
RNF40-209ENST00000566703 ZC3H7BQ9UGR2 993 aaKnown RBP14.32□□□□□ -0.12
RNF40-209ENST00000566703 SOX13Q9UN79 622 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 VPS9D1Q9Y2B5 631 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 NTNG1Q9Y2I2 539 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 CCDC88CQ9P219 2028 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 A0A0J9YVX5 310 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 PCDH17O14917 1159 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 PRPF4O43172 522 aaKnown RBP eCLIP14.31□□□□□ -0.12
RNF40-209ENST00000566703 HPP00738 406 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 ZGLP1P0C6A0 271 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 TPSB2P20231 275 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 CHRM3P20309 590 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 MGAT1P26572 445 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 ARNTP27540 789 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 SARNPP82979 210 aaKnown RBP14.31□□□□□ -0.12
RNF40-209ENST00000566703 TLR1Q15399 786 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 TPSAB1Q15661 275 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 HIF1AQ16665 826 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 PRTGQ2VWP7 1150 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 CTSL3PQ5NE16 218 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 ATG9BQ674R7 924 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 FRMPD2BQ6IN97 320 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 RPUSD3Q6P087 351 aaKnown RBP14.31□□□□□ -0.12
RNF40-209ENST00000566703 CNSTQ6PJW8 725 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 NEK10Q6ZWH5 1172 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 PARP9Q8IXQ6 854 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 OTUD6BQ8N6M0 293 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 SPC24Q8NBT2 197 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 SMPDL3AQ92484 453 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 MIEF2Q96C03 454 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 DPH7Q9BTV6 452 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 CRB3Q9BUF7 120 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 FAM114A2Q9NRY5 505 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 KLHL42Q9P2K6 505 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 NOVA2Q9UNW9 492 aaKnown RBP14.31□□□□□ -0.12
RNF40-209ENST00000566703 MAU2Q9Y6X3 613 aa14.31□□□□□ -0.12
RNF40-209ENST00000566703 RP1L1Q8IWN7 2480 aaPredicted RBP14.3□□□□□ -0.12
RNF40-209ENST00000566703 LOC105369274A0A096LPK9 316 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 LOC102723532A0A0G2JNH3 316 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 A0A1W2PQ72 361 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 A1L4Q6 167 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 MAGEB16A2A368 324 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 ZNF839A8K0R7 811 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 MYO1CO00159 1063 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 PSIP1O75475 530 aaKnown RBP14.3□□□□□ -0.12
RNF40-209ENST00000566703 ERVK-10P10266 1014 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 PKMP14618 531 aaKnown RBP14.3□□□□□ -0.12
RNF40-209ENST00000566703 PAMP19021 973 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 OGNP20774 298 aaKnown RBP14.3□□□□□ -0.12
RNF40-209ENST00000566703 FDXRP22570 491 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 PSMB5P28074 263 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 KLC1Q07866 573 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 MFAP5Q13361 173 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 ZNF169Q14929 603 aaPredicted RBP14.3□□□□□ -0.12
RNF40-209ENST00000566703 GARNL3Q5VVW2 1013 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 KIAA0930Q6ICG6 404 aaPredicted RBP14.3□□□□□ -0.12
RNF40-209ENST00000566703 SHISA6Q6ZSJ9 500 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 OR4N4Q8N0Y3 316 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 FAR1Q8WVX9 515 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 THOC3Q96J01 351 aaKnown RBP14.3□□□□□ -0.12
RNF40-209ENST00000566703 PLCD4Q9BRC7 762 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 CSAG2Q9Y5P2 127 aa14.3□□□□□ -0.12
RNF40-209ENST00000566703 USP9XQ93008 2570 aaPredicted RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 H0YGG7 62 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 TXNDC9O14530 226 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 MAP2K7O14733 419 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 NIPSNAP2O75323 286 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 VPS26AO75436 327 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 USP1O94782 785 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 CCNDBP1O95273 360 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 MED26O95402 600 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 FGGP02679 453 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 CATP04040 527 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 EIF2S1P05198 315 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 EDN3P14138 238 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 ACPPP15309 386 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 MAGEA6P43360 314 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 KCNJ1P48048 391 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 EMP2P54851 167 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 ARF3P61204 181 aaPredicted RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 PRDX1Q06830 199 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 Q0VFX4 171 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 FASTKQ14296 549 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 NEPROQ6NW34 567 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 METTL27Q8N6F8 245 aaPredicted RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 FBXO15Q8NCQ5 510 aaPredicted RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 GRHL3Q8TE85 626 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 MRPS30Q9NP92 439 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 INTS10Q9NVR2 710 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 SYBUQ9NX95 663 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 C3orf18Q9UK00 162 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 RUVBL2Q9Y230 463 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 CRYL1Q9Y2S2 319 aa14.29□□□□□ -0.12
RNF40-209ENST00000566703 SNRNP200O75643 2136 aaKnown RBP14.29□□□□□ -0.12
RNF40-209ENST00000566703 ARHGEF33A8MVX0 844 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms