RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PYCR2Q96C36 320 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 TMEM74Q96NL1 305 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 DEPDC7Q96QD5 511 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 OR2A14Q96R47 310 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 MAP3K3Q99759 626 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 ACAT2Q9BWD1 397 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 TWSG1Q9GZX9 223 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 SEMA6CQ9H3T2 930 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 CNOT10Q9H9A5 744 aaKnown RBP11.07□□□□□ -0.64
KARS-207ENST00000566560 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 EMCNQ9ULC0 261 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 GRID1Q9ULK0 1009 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 TMCO1Q9UM00 188 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 CLCA2Q9UQC9 943 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 PCDHB11Q9Y5F2 797 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 ACTL7BQ9Y614 415 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 HEATR5BQ9P2D3 2071 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 KIF26BQ2KJY2 2108 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 IGHV5-10-1A0A0J9YXX1 117 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 A0A0J9YY10 115 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 MAP2K7O14733 419 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 SIAH2O43255 324 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 KIF1CO43896 1103 aaKnown RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 KLK8O60259 260 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 PLIN3O60664 434 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 CSO75390 466 aaKnown RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 WDR47O94967 919 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 MT-CO3P00414 261 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 PROCP04070 461 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 ANKRD34CP0C6C1 535 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 CREB1P16220 341 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 TAC1P20366 129 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 PRDX3P30048 256 aaKnown RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 CCKBRP32239 447 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 SLC6A12P48065 614 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 HSPA7P48741 367 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 ALDH18A1P54886 795 aaKnown RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 FOXC1Q12948 553 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 SETDB1Q15047 1291 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 SF1Q15637 639 aaKnown RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 PFKFB4Q16877 469 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 ZXDCQ2QGD7 858 aaPredicted RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 PTCHD3Q3KNS1 767 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 CCDC153Q494R4 210 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 AGBL2Q5U5Z8 902 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 CACHD1Q5VU97 1274 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 ICE2Q659A1 982 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 ZNF574Q6ZN55 896 aaPredicted RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 LRRC70Q7Z2Q7 622 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 EXOC3L1Q86VI1 746 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 FAM20CQ8IXL6 584 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 RCBTB1Q8NDN9 531 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 OR2L3Q8NG85 312 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 OR56A3Q8NH54 315 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 PPM1MQ96MI6 270 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 MIPEPQ99797 713 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 SGPP1Q9BX95 441 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 PITPNM3Q9BZ71 974 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 PCBD2Q9H0N5 130 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 SSU72Q9NP77 194 aaKnown RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 SOHLH2Q9NX45 425 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 MID2Q9UJV3 735 aa11.06□□□□□ -0.64
KARS-207ENST00000566560 PTBP2Q9UKA9 531 aaKnown RBP11.06□□□□□ -0.64
KARS-207ENST00000566560 A8MT66 165 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 A8MU76 341 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 DYNC1I1O14576 645 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 TOX3O15405 576 aaPredicted RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 TAPBPO15533 448 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 PRICKLE3O43900 615 aaPredicted RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 TYROBPO43914 113 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 CCNT2O60583 730 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 STK16O75716 305 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 FKBP9O95302 570 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 SBK3P0C264 359 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 MYL2P10916 166 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 PVRP15151 417 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ST6GAL1P15907 406 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 MAGP20916 626 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 CMPK1P30085 196 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 GDF5P43026 501 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 LSSP48449 732 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ARL4DP49703 201 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 SEPHS1P49903 392 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 AGTR2P50052 363 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 MAGOHP61326 146 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 NFKB2Q00653 900 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 TRA2AQ13595 282 aaKnown RBP eCLIP11.05□□□□□ -0.64
KARS-207ENST00000566560 NAA25Q14CX7 972 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ISXQ2M1V0 245 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 LCTLQ6UWM7 567 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ZYG11AQ6WRX3 759 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 THOC6Q86W42 341 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 C17orf64Q86WR6 236 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 TMPRSS12Q86WS5 348 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 KLHDC8AQ8IYD2 350 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 CARFQ8N187 725 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 GALNT15Q8N3T1 639 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 TMEM151AQ8N4L1 468 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 DCBLD1Q8N8Z6 715 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms