RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 RNF165Q6ZSG1 346 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 TRIM69Q86WT6 500 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 DCUN1D3Q8IWE4 304 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 LINC01555Q8NAE3 123 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 OR7G3Q8NG95 312 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 TOE1Q96GM8 510 aaKnown RBP10.97□□□□□ -0.65
LINC00562-201ENST00000566385 SGK2Q9HBY8 427 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 C1orf109Q9NX04 203 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 ADA2Q9NZK5 511 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 ARHGEF17Q96PE2 2063 aaPredicted RBP10.97□□□□□ -0.65
LINC00562-201ENST00000566385 A0A1W2PP18 115 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 PRORSD1PA6NEY8 169 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 ANGPT2O15123 496 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 PSMG1O95456 288 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 BCKDHAP12694 445 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 HNRNPA2B1P22626 353 aaKnown RBP10.97□□□□□ -0.65
LINC00562-201ENST00000566385 CASP2P42575 452 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 DMPKQ09013 629 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 CCNIQ14094 377 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 TLR1Q15399 786 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 TRMT5Q32P41 509 aaKnown RBP10.97□□□□□ -0.65
LINC00562-201ENST00000566385 USP39Q53GS9 565 aaKnown RBP10.97□□□□□ -0.65
LINC00562-201ENST00000566385 SLC2A7Q6PXP3 512 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 CHCHD4Q8N4Q1 142 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 DEFB123Q8N688 67 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 XKR8Q9H6D3 395 aa10.97□□□□□ -0.65
LINC00562-201ENST00000566385 CCDC177Q9NQR7 707 aaPredicted RBP10.97□□□□□ -0.65
LINC00562-201ENST00000566385 SDK1Q7Z5N4 2213 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 SNRNP200O75643 2136 aaKnown RBP10.96□□□□□ -0.65
LINC00562-201ENST00000566385 LRRC72A6NJI9 287 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 FPGTO14772 594 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 UGDHO60701 494 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 CIB2O75838 187 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 B3GALT4O96024 378 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 MRPL19P49406 292 aaKnown RBP10.96□□□□□ -0.65
LINC00562-201ENST00000566385 KCNK10P57789 538 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 MLLT1Q03111 559 aaPredicted RBP10.96□□□□□ -0.65
LINC00562-201ENST00000566385 GRIK2Q13002 908 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 RCN1Q15293 331 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 GRHL2Q6ISB3 625 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 SYT13Q7L8C5 426 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 ZFAND4Q86XD8 727 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 HUS1BQ8NHY5 278 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 PYDC1Q8WXC3 89 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 BIRC7Q96CA5 298 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 SCARF2Q96GP6 870 aaPredicted RBP10.96□□□□□ -0.65
LINC00562-201ENST00000566385 APOLD1Q96LR9 279 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 FERD3LQ96RJ6 166 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 GPR174Q9BXC1 333 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 EBPLQ9BY08 206 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 TMEM168Q9H0V1 697 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 PCDHAC1Q9H158 963 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.65
LINC00562-201ENST00000566385 GEMIN8Q9NWZ8 242 aaKnown RBP10.96□□□□□ -0.65
LINC00562-201ENST00000566385 ZIM2Q9NZV7 527 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 TBC1D29Q9UFV1 150 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 CROTQ9UKG9 612 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 ACSL5Q9ULC5 683 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 PRPF19Q9UMS4 504 aaKnown RBP10.96□□□□□ -0.65
LINC00562-201ENST00000566385 FANCMQ8IYD8 2048 aa10.96□□□□□ -0.65
LINC00562-201ENST00000566385 TDRD6O60522 2096 aaKnown RBP10.96□□□□□ -0.66
LINC00562-201ENST00000566385 NUP214P35658 2090 aaPredicted RBP10.96□□□□□ -0.66
LINC00562-201ENST00000566385 HEATR5BQ9P2D3 2071 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 CCDC154A6NI56 674 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 PDZK1P1A8MUH7 402 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 C10orf142B7Z368 130 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 H0YIV9 168 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 MAN2B1O00754 1011 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 MAP3K7O43318 606 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 PCNAP12004 261 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 AMD1P17707 334 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 KELP23276 732 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 CCND1P24385 295 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 DGKEP52429 567 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 SLC7A2P52569 658 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 E2F2Q14209 437 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 FAM20CQ8IXL6 584 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 SLC22A18ASQ8N1D0 253 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 TMEM145Q8NBT3 493 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 DNAJB14Q8TBM8 379 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 MAGEC3Q8TD91 643 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 JPH3Q8WXH2 748 aaPredicted RBP10.96□□□□□ -0.66
LINC00562-201ENST00000566385 ASB12Q8WXK4 309 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 GFM2Q969S9 779 aaKnown RBP10.96□□□□□ -0.66
LINC00562-201ENST00000566385 TSSK3Q96PN8 268 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 GPATCH1Q9BRR8 931 aaKnown RBP10.96□□□□□ -0.66
LINC00562-201ENST00000566385 TIMM29Q9BSF4 260 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 DCLRE1BQ9H816 532 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 TAC3Q9UHF0 121 aa10.96□□□□□ -0.66
LINC00562-201ENST00000566385 TRBV23OR9-2A0A075B6M9 112 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 A0A1W2PPV9 198 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 FAM234BA2RU67 622 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 LRATO95237 230 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 ERGP11308 486 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 CDH1P12830 882 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SDC1P18827 310 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 HNF4AP41235 474 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 CCR3P51677 355 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 SESN3P58005 492 aa10.95□□□□□ -0.66
LINC00562-201ENST00000566385 CTBSQ01459 385 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms