RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	ERVK-11	Q9UQG0	969 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	UGT2B11	O75310	529 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	CCNDBP1	O95273	360 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	OLFM2	O95897	454 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	FUCA1	P04066	466 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	GJA1	P17302	382 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	SLC6A12	P48065	614 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	PGS1	Q32NB8	556 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	TPGS2	Q68CL5	300 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	LAIR1	Q6GTX8	287 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	DOK6	Q6PKX4	331 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	RFLNA	Q6ZTI6	216 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	LRRC70	Q7Z2Q7	622 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	L3MBTL4	Q8NA19	623 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	CMTM7	Q96FZ5	175 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ELOVL6	Q9H5J4	265 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	IL1RAP	Q9NPH3	570 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	SNX6	Q9UNH7	406 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	ERGIC3	Q9Y282	383 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	B3GNT3	Q9Y2A9	372 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	SNX5	Q9Y5X3	404 aa		12.79	□□□□□ -0.36
SCAPER-215	ENST00000565507	IGLV3-16	A0A075B6K0	115 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	NDUFS2	O75306	463 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	LRAT	O95237	230 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	FTH1	P02794	183 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	SOD2	P04179	222 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	IGFBP5	P24593	272 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	AOAH	P28039	575 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	DAP	P51397	102 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	HNRNPF	P52597	415 aa	Known RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	PTPN5	P54829	565 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	PTS	Q03393	145 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	MTAP	Q13126	283 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	NR1D2	Q14995	579 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	LAPTM4A	Q15012	233 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	PTCHD3	Q3KNS1	767 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	LRRC66	Q68CR7	880 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	TXNDC8	Q6A555	127 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	OR4F3	Q6IEY1	312 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	UBE2R2	Q712K3	238 aa	Predicted RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	GALNT5	Q7Z7M9	940 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	SERPINA11	Q86U17	422 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	VRK3	Q8IV63	474 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	ASB11	Q8WXH4	323 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	PYCR2	Q96C36	320 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	AASDHPPT	Q9NRN7	309 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	INTS6	Q9UL03	887 aa	Known RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	COQ6	Q9Y2Z9	468 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	CPQ	Q9Y646	472 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	DGKB	Q9Y6T7	804 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	FUOM	A2VDF0	154 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZBBX	A8MT70	800 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZNF99	A8MXY4	864 aa	Predicted RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	BOLA2-SMG1P6	H3BVE0	249 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	RFXANK	O14593	260 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	TEX28	O15482	410 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	ZSCAN9	O15535	394 aa	Predicted RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	SEMG1	P04279	462 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	OCM2	P0CE71	109 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	OCM	P0CE72	109 aa	Predicted RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	AMD1	P17707	334 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	IDUA	P35475	653 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	OPRL1	P41146	370 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	CLK3	P49761	638 aa	Known RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	LMAN2	Q12907	356 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	KDM4D	Q6B0I6	523 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	PIWIL3	Q7Z3Z3	882 aa	Known RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	B3GNT8	Q7Z7M8	397 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	IGFN1	Q86VF2	1251 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	PGBD3	Q8N328	593 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	PAF1	Q8N7H5	531 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	SCRN2	Q96FV2	425 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	APOLD1	Q96LR9	279 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	COPS8	Q99627	209 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	DUSP21	Q9H596	190 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	ABCB8	Q9NUT2	735 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	AASS	Q9UDR5	926 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	SAMD4A	Q9UPU9	718 aa	Known RBP	12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	TMED5	Q9Y3A6	229 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	TRIO	O75962	3097 aa		12.78	□□□□□ -0.36
SCAPER-215	ENST00000565507	KRT87P	A6NCN2	255 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	CFAP99	D6REC4	459 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	EIF3F	O00303	357 aa	Predicted RBP	12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	SCN2B	O60939	215 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	GABARAP	O95166	117 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	ANGPTL1	O95841	491 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	JUND	P17535	347 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	LHCGR	P22888	699 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	SERPINA4	P29622	427 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	GJA8	P48165	433 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	CD97	P48960	835 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	SLC35A2	P78381	396 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	IL5RA	Q01344	420 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	VEPH1	Q14D04	833 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	LDLRAP1	Q5SW96	308 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	OR2T5	Q6IEZ7	315 aa		12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.77	□□□□□ -0.36
SCAPER-215	ENST00000565507	MSANTD1	Q6ZTZ1	278 aa		12.77	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms