RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 LMAN1LQ9HAT1 526 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 FAM207AQ9NSI2 230 aaPredicted RBP4.27□□□□□ -1.73
LINC00560-201ENST00000564593 EEA1Q15075 1411 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 EIF4G1Q04637 1599 aaKnown RBP4.27□□□□□ -1.73
LINC00560-201ENST00000564593 A0A0U1RQK1 487 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 ZNF320A2RRD8 509 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 A4D1N5 150 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 PPIP5K2O43314 1243 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 PRAF2O60831 178 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 FCGR3BO75015 233 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 IGHV4-31P0DP07 118 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 EPORP19235 508 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 CA6P23280 308 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 CD27P26842 260 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 PSMB4P28070 264 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 CEACAM8P31997 349 aaPredicted RBP4.27□□□□□ -1.73
LINC00560-201ENST00000564593 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
LINC00560-201ENST00000564593 TAZQ16635 292 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 C20orf194Q5TEA3 1177 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 TXNRD3NBQ6F5E7 133 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 OR4A47Q6IF82 309 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 NOTUMQ6P988 496 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 PIWIL3Q7Z3Z3 882 aaKnown RBP4.27□□□□□ -1.73
LINC00560-201ENST00000564593 HOOK3Q86VS8 718 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 C4orf19Q8IY42 314 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 ZNF843Q8N446 348 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 OR10Q1Q8NGQ4 319 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 PGM2Q96G03 612 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 CCDC3Q9BQI4 270 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 OR2B2Q9GZK3 357 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 PEG3Q9GZU2 1588 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 C2orf40Q9H1Z8 148 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 ADPRHL2Q9NX46 363 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 P4HTMQ9NXG6 502 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 FLRT3Q9NZU0 649 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 SEPT10Q9P0V9 454 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 ZNF580Q9UK33 172 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 CDH7Q9ULB5 785 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 PROCRQ9UNN8 238 aa4.27□□□□□ -1.73
LINC00560-201ENST00000564593 EME2A4GXA9 379 aaPredicted RBP4.26□□□□□ -1.73
LINC00560-201ENST00000564593 OOEPA6NGQ2 149 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 SLC30A4O14863 429 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 SLC22A3O75751 556 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 IGLV2-11P01706 119 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 STAG3L1P0CL83 205 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 NKX2-1P43699 371 aaPredicted RBP4.26□□□□□ -1.73
LINC00560-201ENST00000564593 KCNJ1P48048 391 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 SLMAPQ14BN4 828 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 HERC3Q15034 1050 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 MEP1BQ16820 701 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 ANKRD20A4Q4UJ75 823 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 ANKRD20A8PQ5CZ79 823 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 XKR3Q5GH77 459 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 SLC35D3Q5M8T2 416 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 ANKRD20A2Q5SQ80 823 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 ANKRD20A1Q5TYW2 823 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 ANKRD20A3Q5VUR7 823 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 SLC35E4Q6ICL7 350 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 CYB5D1Q6P9G0 228 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 PHLDB2Q86SQ0 1253 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 KBTBD8Q8NFY9 601 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 RIT1Q92963 219 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 INPP4AQ96PE3 977 aaPredicted RBP4.26□□□□□ -1.73
LINC00560-201ENST00000564593 VPS18Q9P253 973 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 ICAM5Q9UMF0 924 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 HEG1Q9ULI3 1381 aa4.26□□□□□ -1.73
LINC00560-201ENST00000564593 SMARCA2P51531 1590 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 YDJCA8MPS7 323 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 ST8SIA3O43173 380 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 SELENOFO60613 162 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 PLGP00747 810 aaPredicted RBP4.25□□□□□ -1.73
LINC00560-201ENST00000564593 SERPING1P05155 500 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 TIA1P31483 386 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC00560-201ENST00000564593 CDX1P47902 265 aaPredicted RBP4.25□□□□□ -1.73
LINC00560-201ENST00000564593 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
LINC00560-201ENST00000564593 GCNT1Q02742 428 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 GPR17Q13304 367 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 SQLEQ14534 574 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 TYSND1Q2T9J0 566 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 CEACAM20Q6UY09 585 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 GBP6Q6ZN66 633 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 C18orf65Q6ZTR6 163 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 CCDC91Q7Z6B0 441 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 NR2C2APQ86WQ0 139 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 APCDD1Q8J025 514 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 NUP93Q8N1F7 819 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 UXS1Q8NBZ7 420 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 OR13C3Q8NGS6 347 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 SEPT1Q8WYJ6 367 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 PYCR2Q96C36 320 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 SENP5Q96HI0 755 aaPredicted RBP4.25□□□□□ -1.73
LINC00560-201ENST00000564593 NODALQ96S42 347 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 DNAI2Q9GZS0 605 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 CPVLQ9H3G5 476 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 ACTL8Q9H568 366 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 CHST11Q9NPF2 352 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 PKD2L2Q9NZM6 624 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 TNNQ9UQP3 1299 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms