RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 GRIA3P42263 894 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 HSPA7P48741 367 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 SEPHS1P49903 392 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 TSTA3Q13630 321 aaPredicted RBP12.01□□□□□ -0.49
KARS-204ENST00000564578 PFKFB4Q16877 469 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 ICE2Q659A1 982 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 KLHDC8AQ8IYD2 350 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 CARFQ8N187 725 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 TSNARE1Q96NA8 513 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 FAM60AQ9NP50 221 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 ABCF3Q9NUQ8 709 aa12.01□□□□□ -0.49
KARS-204ENST00000564578 A0A0J9YY10 115 aa12□□□□□ -0.49
KARS-204ENST00000564578 LRRC14BA6NHZ5 514 aa12□□□□□ -0.49
KARS-204ENST00000564578 HGSO14964 777 aaPredicted RBP12□□□□□ -0.49
KARS-204ENST00000564578 HCRTR1O43613 425 aa12□□□□□ -0.49
KARS-204ENST00000564578 PLIN3O60664 434 aa12□□□□□ -0.49
KARS-204ENST00000564578 NELFEP18615 380 aaKnown RBP12□□□□□ -0.49
KARS-204ENST00000564578 SPINK2P20155 84 aa12□□□□□ -0.49
KARS-204ENST00000564578 CCND1P24385 295 aa12□□□□□ -0.49
KARS-204ENST00000564578 RPA3P35244 121 aaPredicted RBP12□□□□□ -0.49
KARS-204ENST00000564578 FOXC1Q12948 553 aa12□□□□□ -0.49
KARS-204ENST00000564578 CAMK2BQ13554 666 aa12□□□□□ -0.49
KARS-204ENST00000564578 SETDB1Q15047 1291 aa12□□□□□ -0.49
KARS-204ENST00000564578 FCRL6Q6DN72 434 aa12□□□□□ -0.49
KARS-204ENST00000564578 CAPN13Q6MZZ7 669 aaPredicted RBP12□□□□□ -0.49
KARS-204ENST00000564578 TCAIMQ8N3R3 496 aa12□□□□□ -0.49
KARS-204ENST00000564578 ARL8AQ96BM9 186 aa12□□□□□ -0.49
KARS-204ENST00000564578 ALKBH8Q96BT7 664 aaKnown RBP12□□□□□ -0.49
KARS-204ENST00000564578 PHF21BQ96EK2 531 aa12□□□□□ -0.49
KARS-204ENST00000564578 LIN37Q96GY3 246 aaPredicted RBP12□□□□□ -0.49
KARS-204ENST00000564578 APOPT1Q96IL0 206 aa12□□□□□ -0.49
KARS-204ENST00000564578 SMC6Q96SB8 1091 aa12□□□□□ -0.49
KARS-204ENST00000564578 SH3GL2Q99962 352 aa12□□□□□ -0.49
KARS-204ENST00000564578 CD244Q9BZW8 370 aa12□□□□□ -0.49
KARS-204ENST00000564578 SLC6A20Q9NP91 592 aa12□□□□□ -0.49
KARS-204ENST00000564578 SENP1Q9P0U3 644 aa12□□□□□ -0.49
KARS-204ENST00000564578 PLLPQ9Y342 182 aa12□□□□□ -0.49
KARS-204ENST00000564578 KLK4Q9Y5K2 254 aa12□□□□□ -0.49
KARS-204ENST00000564578 HEATR5BQ9P2D3 2071 aa12□□□□□ -0.49
KARS-204ENST00000564578 G3V2L1 256 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 DLX3O60479 287 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 STK16O75716 305 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 SIX3O95343 332 aaPredicted RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 ZBTB11O95625 1053 aaPredicted RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 CCL4P13236 92 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 GFAPP14136 432 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 EPORP19235 508 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 ALDH18A1P54886 795 aaKnown RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 SH3BP2P78314 561 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 MPP2Q14168 576 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 KCNAB1Q14722 419 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 THEMIS2Q5TEJ8 643 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 PRAMEF13Q5VWM6 474 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 THOC6Q86W42 341 aaKnown RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 FBXO39Q8N4B4 442 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 BMPERQ8N8U9 685 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 TCP10LQ8TDR4 215 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 UBTD2Q8WUN7 234 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 NEIL2Q969S2 332 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 GRAMD1AQ96CP6 724 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 TLCD1Q96CP7 247 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 DPH7Q9BTV6 452 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 SCNM1Q9BWG6 230 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 CUEDC1Q9NWM3 386 aaPredicted RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 SIDT1Q9NXL6 827 aaKnown RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 WWOXQ9NZC7 414 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 SLC17A7Q9P2U7 560 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 KLK13Q9UKR3 277 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 SPTBP11277 2137 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 A8MT66 165 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 PRAMEF4O60810 478 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 ADRB1P08588 477 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 FGF3P11487 239 aaPredicted RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 HGFP14210 728 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 FOLR1P15328 257 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 HSD11B2P80365 405 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 PRAMEF9Q5VWM5 478 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 ZNF425Q6IV72 752 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 LCTLQ6UWM7 567 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 RAB11FIP2Q7L804 512 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 KMT5CQ86Y97 462 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 D2HGDHQ8N465 521 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 PTGR2Q8N8N7 351 aaPredicted RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 C19orf47Q8N9M1 422 aaKnown RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 AGBL5Q8NDL9 886 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 ZUFSPQ96AP4 578 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 PRR11Q96HE9 360 aaPredicted RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 RUFY1Q96T51 708 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 CMKLR1Q99788 373 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 PCBD2Q9H0N5 130 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 SYNPO2LQ9H987 977 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 CNOT10Q9H9A5 744 aaKnown RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 MRPS30Q9NP92 439 aaKnown RBP11.99□□□□□ -0.49
KARS-204ENST00000564578 BTRCQ9Y297 605 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 ACTL7BQ9Y614 415 aa11.99□□□□□ -0.49
KARS-204ENST00000564578 OR2A25A4D2G3 310 aa11.98□□□□□ -0.49
KARS-204ENST00000564578 TMX2-CTNND1H3BSU7 103 aa11.98□□□□□ -0.49
KARS-204ENST00000564578 H7BY64 318 aa11.98□□□□□ -0.49
KARS-204ENST00000564578 E2F3O00716 465 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms