RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 A0A0G2JLW4 131 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 C5orf52A6NGY3 159 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 CCL24O00175 119 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 WDR46O15213 610 aaKnown RBP5□□□□□ -1.61
LINC00557-201ENST00000563184 SNX3O60493 162 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 RPS6KA5O75582 802 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 EDN1P05305 212 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 CFC1BP0CG36 223 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 CFC1P0CG37 223 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 GP1BBP13224 206 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 CSTF2P33240 577 aaKnown RBP eCLIP5□□□□□ -1.61
LINC00557-201ENST00000563184 MFAP3P55082 362 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 CDR2Q01850 454 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 TNK1Q13470 666 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 ZRANB3Q5FWF4 1079 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 XKR6Q5GH73 641 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 C20orf194Q5TEA3 1177 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 SHEQ5VZ18 495 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 C15orf39Q6ZRI6 1047 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 ANKRD33Q7Z3H0 272 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 TIGD4Q8IY51 512 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 KIRREL3Q8IZU9 778 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 APCDD1Q8J025 514 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 NDUFAF2Q8N183 169 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 RYBPQ8N488 228 aaPredicted RBP5□□□□□ -1.61
LINC00557-201ENST00000563184 CNBD1Q8NA66 436 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 GRAPLQ8TC17 118 aaPredicted RBP5□□□□□ -1.61
LINC00557-201ENST00000563184 GIMAP5Q96F15 307 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 ERO1AQ96HE7 468 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 MAP3K3Q99759 626 aa5□□□□□ -1.61
LINC00557-201ENST00000563184 PRR23AA6NEV1 266 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 O00370 1275 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 PRAF2O60831 178 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 TRMUO75648 421 aaKnown RBP4.99□□□□□ -1.61
LINC00557-201ENST00000563184 BAG3O95817 575 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 APOHP02749 345 aaPredicted RBP4.99□□□□□ -1.61
LINC00557-201ENST00000563184 FAM157CP0CG43 387 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 LBPP18428 481 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 PSMB4P28070 264 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 TIA1P31483 386 aaKnown RBP eCLIP4.99□□□□□ -1.61
LINC00557-201ENST00000563184 MAP2K2P36507 400 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 GNB1P62873 340 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 ILF2Q12905 390 aaKnown RBP4.99□□□□□ -1.61
LINC00557-201ENST00000563184 NONOQ15233 471 aaKnown RBP eCLIP4.99□□□□□ -1.61
LINC00557-201ENST00000563184 GTDC1Q4AE62 458 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 ARHGEF16Q5VV41 709 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 SPATA21Q7Z572 469 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 NRARPQ7Z6K4 114 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 ZNF329Q86UD4 541 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 KLHDC1Q8N7A1 406 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 FAM76AQ8TAV0 307 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 TMEM190Q8WZ59 177 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 ZWILCHQ9H900 591 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 GRPEL1Q9HAV7 217 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 TNNQ9UQP3 1299 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 KCNK7Q9Y2U2 307 aa4.99□□□□□ -1.61
LINC00557-201ENST00000563184 A0A1W2PPW3 197 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 MOCS3O95396 460 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 SPP1P10451 314 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 GLIPR1P48060 266 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 GPR33Q49SQ1 333 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 PDLIM3Q53GG5 364 aaPredicted RBP4.98□□□□□ -1.61
LINC00557-201ENST00000563184 LRRC73Q5JTD7 316 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 TXNRD3NBQ6F5E7 133 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 UGT3A1Q6NUS8 523 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 SIX6OS1Q8N1H7 587 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 OR13C3Q8NGS6 347 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 P2RX5Q93086 422 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 EXOC4Q96A65 974 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 FSD1Q9BTV5 496 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 THAP2Q9H0W7 228 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 ATP13A3Q9H7F0 1226 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 ZNF696Q9H7X3 374 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 C2orf42Q9NWW7 574 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 DISP3Q9P2K9 1392 aa4.98□□□□□ -1.61
LINC00557-201ENST00000563184 MSGN1A6NI15 193 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 C2CD4DB7Z1M9 353 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 PSMD14O00487 310 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 FPGTO14772 594 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 SLC7A4O43246 635 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 FCGR3BO75015 233 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 AP2A2O94973 939 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 EML2O95834 649 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 SERPING1P05155 500 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 CEACAM1P13688 526 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 GNB3P16520 340 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 CASTP20810 708 aaKnown RBP4.97□□□□□ -1.61
LINC00557-201ENST00000563184 CHRNB4P30926 498 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 MAGEA11P43364 429 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 HERV-K104P61576 105 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 SCN1BQ07699 218 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 TRAP1Q12931 704 aaKnown RBP4.97□□□□□ -1.61
LINC00557-201ENST00000563184 RRS1Q15050 365 aaKnown RBP4.97□□□□□ -1.61
LINC00557-201ENST00000563184 CDO1Q16878 200 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 ZNF876PQ49A33 203 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 FFAR4Q5NUL3 377 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 C1QTNF12Q5T7M4 302 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 NOTUMQ6P988 496 aa4.97□□□□□ -1.61
LINC00557-201ENST00000563184 MARVELD2Q8N4S9 558 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms